Mir-15-P1b

MirGeneDB ID

Mml-Mir-15-P1b

Family name

MIR-15 (all species)

Seed

AGCAGCA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-15b

Paralogues

Mml-Mir-15-P1a Mml-Mir-15-P1c Mml-Mir-15-P1d Mml-Mir-15-P2a Mml-Mir-15-P2b Mml-Mir-15-P2c Mml-Mir-15-P2d

Orthologues

Aca-Mir-15-P1b Ami-Mir-15-P1b Bta-Mir-15-P1b Cfa-Mir-15-P1b Cin-Mir-15-P1 Cja-Mir-15-P1b Cli-Mir-15-P1b Cmi-Mir-15-P1b Cpi-Mir-15-P1b Cpo-Mir-15-P1b Dno-Mir-15-P1b Dre-Mir-15-P1b Eca-Mir-15-P1b Ete-Mir-15-P1b Gga-Mir-15-P1b Gja-Mir-15-P1b Gmo-Mir-15-P1b Hsa-Mir-15-P1b Laf-Mir-15-P1b Lch-Mir-15-P1b Loc-Mir-15-P1b Mal-Mir-15-P1b Mmr-Mir-15-P1b Mmu-Mir-15-P1b Mun-Mir-15-P1b Oan-Mir-15-P1b Ocu-Mir-15-P1b Pab-Mir-15-P1b Pbv-Mir-15-P1b Rno-Mir-15-P1b Sha-Mir-15-P1b Spt-Mir-15-P1b Sto-Mir-15-P1b Tgu-Mir-15-P1b Tni-Mir-15-P1b Xla-Mir-15-P1b1 Xla-Mir-15-P1b2 Xtr-Mir-15-P1b

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Olfactores

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014337.1: 62678317-62678376 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-15-P1b)

Mir-15-P1b CM014337.1: 62678317-62678376 [+] UCSC Ensembl
Mir-15-P2b CM014337.1: 62678464-62678528 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AUCCUGUAUUUUUGAGGCCUUAAAGUACUGUAGCAGCACAUCAUGGUUUACAUACUACAGUCAAGAUGCGAAUCAUUAUUUGCUGCUCUAGAAAUUUAAGGAAAUUCAUUCAAAACUAUG

Get precursor sequence

Structure

        10          20        30        40        50         
AUCCUGUAUUUUUGAGG--|      GUA   U       C  C      UA  UACUAC 
                   CCUUAAA   CUG AGCAGCA AU AUGGUU  CA      A
                   GGAAUUU   GAU UCGUCGU UA UACUAA  GU      G
GUAUCAAAACUUACUUAAA^      AAA   C       U  U      GC  AGAACU 
.       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-15-P1b_5p

mirBase accession

MIMAT0002207

Sequence

0- UAGCAGCACAUCAUGGUUUACA -22

Get sequence

Proposed targets

TargetScanVert: mml-miR-15b-5p

Star sequence

Mml-Mir-15-P1b_3p*

mirBase accession

MIMAT0026562

Sequence

38- CGAAUCAUUAUUUGCUGCUCUA -60

Get sequence

Proposed targets

TargetScanVert: mml-miR-15b-3p