MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-15-P1b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-15b
Paralogues Gga-Mir-15-P1a  Gga-Mir-15-P1c  Gga-Mir-15-P2a  Gga-Mir-15-P2b  Gga-Mir-15-P2c 
Orthologues Aca-Mir-15-P1b  Ami-Mir-15-P1b  Bta-Mir-15-P1b  Cfa-Mir-15-P1b  Cin-Mir-15-P1  Cja-Mir-15-P1b  Cli-Mir-15-P1b  Cmi-Mir-15-P1b  Cpi-Mir-15-P1b  Cpo-Mir-15-P1b  Dno-Mir-15-P1b  Dre-Mir-15-P1b  Eca-Mir-15-P1b  Ete-Mir-15-P1b  Gja-Mir-15-P1b  Gmo-Mir-15-P1b  Hsa-Mir-15-P1b  Laf-Mir-15-P1b  Lch-Mir-15-P1b  Loc-Mir-15-P1b  Mal-Mir-15-P1b  Mml-Mir-15-P1b  Mmr-Mir-15-P1b  Mmu-Mir-15-P1b  Mun-Mir-15-P1b  Oan-Mir-15-P1b  Ocu-Mir-15-P1b  Pab-Mir-15-P1b  Pbv-Mir-15-P1b  Rno-Mir-15-P1b  Sha-Mir-15-P1b  Spt-Mir-15-P1b  Sto-Mir-15-P1b  Tgu-Mir-15-P1b  Tni-Mir-15-P1b  Xla-Mir-15-P1b1  Xla-Mir-15-P1b2  Xtr-Mir-15-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(Gallus_gallus.GRCg6a)		 9: 22340900-22340959 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1b)		 Mir-15-P2b 9: 22340725-22340789 [-] UCSC Ensembl
Mir-15-P1b 9: 22340900-22340959 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUCUUGUGUGUGAGGCCUUAAAGUACUCUAGCAGCACAUCAUGGUUUGCAUGCUGUAGUGAAGAUGCGAAUCAUUAUUUGCUGCUUUAGAAAUUUAAGGAAGAUAAACAGUUGAAGAC
Get precursor sequence
Structure
        10          20        30        40        50         
GAGUCUUGUGUGUGAGG--|      GUA  CU       C  C          UGCUGU 
                   CCUUAAA   CU  AGCAGCA AU AUGGUUUGCA      A
                   GGAAUUU   GA  UCGUCGU UA UACUAAGCGU      G
CAGAAGUUGACAAAUAGAA^      AAA  UU       U  U          AGAAGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-15-P1b_5p
mirBase accessionMIMAT0001154
Sequence 
0- UAGCAGCACAUCAUGGUUUGCA -22
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Proposed targets TargetScanVert: gga-miR-15b-5p
miRDB: MIMAT0001154
Star sequence

Gga-Mir-15-P1b_3p*
mirBase accessionMIMAT0026524
Sequence 
38- CGAAUCAUUAUUUGCUGCUUUA -60
Get sequence
Proposed targets TargetScanVert: gga-miR-15b-3p
miRDB: MIMAT0026524