| MirGeneDB ID | Pab-Mir-15-P1b |
|---|---|
| Family name | MIR-15 (all species) |
| Seed | AGCAGCA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-15-P1a Pab-Mir-15-P1c Pab-Mir-15-P1d Pab-Mir-15-P2a Pab-Mir-15-P2b Pab-Mir-15-P2c Pab-Mir-15-P2d |
| Orthologues | Aca-Mir-15-P1b Ami-Mir-15-P1b Bta-Mir-15-P1b Cfa-Mir-15-P1b Cin-Mir-15-P1 Cja-Mir-15-P1b Cli-Mir-15-P1b Cmi-Mir-15-P1b Cpi-Mir-15-P1b Cpo-Mir-15-P1b Dno-Mir-15-P1b Dre-Mir-15-P1b Eca-Mir-15-P1b Ete-Mir-15-P1b Gga-Mir-15-P1b Gja-Mir-15-P1b Gmo-Mir-15-P1b Hsa-Mir-15-P1b Laf-Mir-15-P1b Lch-Mir-15-P1b Loc-Mir-15-P1b Mal-Mir-15-P1b Mml-Mir-15-P1b Mmr-Mir-15-P1b Mmu-Mir-15-P1b Mun-Mir-15-P1b Oan-Mir-15-P1b Ocu-Mir-15-P1b Pbv-Mir-15-P1b Rno-Mir-15-P1b Sha-Mir-15-P1b Spt-Mir-15-P1b Sto-Mir-15-P1b Tgu-Mir-15-P1b Tni-Mir-15-P1b Xla-Mir-15-P1b1 Xla-Mir-15-P1b2 Xtr-Mir-15-P1b |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Olfactores |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068843.1: 170128686-170128745 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUCCUAUGUUUUUGAGGCCUUAAAGUACUGUAGCAGCACAUCAUGGUUUACAUGCUACAGUCAAGAUGCGAAUCAUUAUUUGCUGCUCUAGAAAUUUAAGGAAAUUCAUUCAAAAGUAUGGet precursor sequence |
| Structure | 10 20 30 40 50 AUCCUAUGUUUUUGAGG--| GUA U C C UA UGCUAC CCUUAAA CUG AGCAGCA AU AUGGUU CA A GGAAUUU GAU UCGUCGU UA UACUAA GU G GUAUGAAAACUUACUUAAA^ AAA C U U GC AGAACU . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Pab-Mir-15-P1b_5p |
| mirBase accession | None |
| Sequence |
0- UAGCAGCACAUCAUGGUUUACA -22
Get sequence
|
| Star sequence | Pab-Mir-15-P1b_3p* |
| mirBase accession | None |
| Sequence |
38- CGAAUCAUUAUUUGCUGCUCUA -60
Get sequence
|
