MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-15-P2c

Family name MIR-15 (all species)
Seed AGCAGCG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-15-P1a  Pab-Mir-15-P1b  Pab-Mir-15-P1c  Pab-Mir-15-P1d  Pab-Mir-15-P2a  Pab-Mir-15-P2b  Pab-Mir-15-P2d 
Orthologues Aca-Mir-15-P2c  Ami-Mir-15-P2c  Bta-Mir-15-P2c  Cfa-Mir-15-P2c  Cin-Mir-15-P2  Cja-Mir-15-P2c  Cli-Mir-15-P2c  Cmi-Mir-15-P2c  Cpi-Mir-15-P2c  Cpo-Mir-15-P2c  Dno-Mir-15-P2c  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2  Eca-Mir-15-P2c  Ete-Mir-15-P2c  Gga-Mir-15-P2c  Gja-Mir-15-P2c  Hsa-Mir-15-P2c  Laf-Mir-15-P2c  Lch-Mir-15-P2c  Loc-Mir-15-P2c  Mdo-Mir-15-P2c-v1  Mdo-Mir-15-P2c-v2  Mml-Mir-15-P2c  Mmr-Mir-15-P2c  Mmu-Mir-15-P2c  Mun-Mir-15-P2c  Neu-Mir-15-P2c-v1  Neu-Mir-15-P2c-v2  Oan-Mir-15-P2c  Ocu-Mir-15-P2c  Pbv-Mir-15-P2c  Rno-Mir-15-P2c3  Rno-Mir-15-P2c4  Sha-Mir-15-P2c-v1  Sha-Mir-15-P2c-v2  Spt-Mir-15-P2c  Tgu-Mir-15-P2c  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2  Xtr-Mir-15-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 140567917-140567979 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGACGCGGUGCCCGCGCUCAGCCGUGCCCUAGCAGCGGGAACAGUUCUGCAGUGAGCGAUUGGUGCUCUGGAGUAUUGUUUCCGCUGCCAGGGUAAGUCUGGGACUGCCGUUCGGGCCUACC
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Structure
        10          20        30        40        50        60 
GGGACGCGGUGCCCGCG--|    CCG      A              U  G   UGAGCGA 
                   CUCAG   UGCCCU GCAGCGGGAACAGU CU CAG       \
                   GGGUC   AUGGGA CGUCGCCUUUGUUA GA GUC       U
CCAUCCGGGCUUGCCGUCA^    UGA      C              U  G   UCGUGGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-15-P2c_5p
mirBase accessionNone
Sequence 
0- UAGCAGCGGGAACAGUUCUGCAG -23
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Star sequence

Pab-Mir-15-P2c_3p* (predicted)
mirBase accessionNone
Sequence 
40- GGAGUAUUGUUUCCGCUGCCAGG -63
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