MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-15-P2c-v1

Family name MIR-15 (all species)
Seed AGCAGCA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-15-P1a  Sha-Mir-15-P1b  Sha-Mir-15-P1c  Sha-Mir-15-P1d  Sha-Mir-15-P2a  Sha-Mir-15-P2b  Sha-Mir-15-P2c-v2  Sha-Mir-15-P2d 
Orthologues Aca-Mir-15-P2c  Ami-Mir-15-P2c  Bta-Mir-15-P2c  Cfa-Mir-15-P2c  Cin-Mir-15-P2  Cli-Mir-15-P2c  Cmi-Mir-15-P2c  Cpi-Mir-15-P2c  Cpo-Mir-15-P2c  Dno-Mir-15-P2c  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2  Ete-Mir-15-P2c  Gga-Mir-15-P2c  Gja-Mir-15-P2c  Hsa-Mir-15-P2c  Lch-Mir-15-P2c  Loc-Mir-15-P2c  Mdo-Mir-15-P2c-v1  Mdo-Mir-15-P2c-v2  Mml-Mir-15-P2c  Mmu-Mir-15-P2c  Mun-Mir-15-P2c  Oan-Mir-15-P2c  Ocu-Mir-15-P2c  Pbv-Mir-15-P2c  Rno-Mir-15-P2c3  Rno-Mir-15-P2c4  Spt-Mir-15-P2c  Tgu-Mir-15-P2c  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2  Xtr-Mir-15-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(DEVIL_add)		 GL867596.1: 499970-500030 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCGAGCGACCCUCCGCUCAGCUGUGCCCUAGCAGCACGUCAAAACUGGAGUCAUCUACCUAAAUCCUCCAGUAUUGCCUUGCUGCUUGAGUGAAGUAGGAGCCUAAUUCAUUUCUCUAC
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Structure
        10         20         30        40        50          
UCUCGAGCGACCCUCCG-   A-|  G   CCU       CGU   A       UCAUCUA 
                  CUC  GCU UGC   AGCAGCA   CAA ACUGGAG       \
                  GAG  UGA GUG   UCGUCGU   GUU UGACCUC       C
CAUCUCUUUACUUAAUCC   GA^  A   AGU       UCC   A       CUAAAUC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-15-P2c-v1_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGUCAAAACUGGAG -22
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Star sequence

Sha-Mir-15-P2c-v1_3p*
mirBase accessionNone
Sequence 
39- CCAGUAUUGCCUUGCUGCUUGA -61
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