MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-15-P2c

Family name MIR-15 (all species)
Seed AGCAGCA
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID
Paralogues Cpi-Mir-15-P1a  Cpi-Mir-15-P1b  Cpi-Mir-15-P1c  Cpi-Mir-15-P2a  Cpi-Mir-15-P2b 
Orthologues Aca-Mir-15-P2c  Ami-Mir-15-P2c  Bta-Mir-15-P2c  Cfa-Mir-15-P2c  Cin-Mir-15-P2  Cja-Mir-15-P2c  Cli-Mir-15-P2c  Cmi-Mir-15-P2c  Cpo-Mir-15-P2c  Dno-Mir-15-P2c  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2  Eca-Mir-15-P2c  Ete-Mir-15-P2c  Gga-Mir-15-P2c  Gja-Mir-15-P2c  Hsa-Mir-15-P2c  Laf-Mir-15-P2c  Lch-Mir-15-P2c  Loc-Mir-15-P2c  Mdo-Mir-15-P2c-v1  Mdo-Mir-15-P2c-v2  Mml-Mir-15-P2c  Mmr-Mir-15-P2c  Mmu-Mir-15-P2c  Mun-Mir-15-P2c  Neu-Mir-15-P2c-v1  Neu-Mir-15-P2c-v2  Oan-Mir-15-P2c  Ocu-Mir-15-P2c  Pab-Mir-15-P2c  Pbv-Mir-15-P2c  Rno-Mir-15-P2c3  Rno-Mir-15-P2c4  Sha-Mir-15-P2c-v1  Sha-Mir-15-P2c-v2  Spt-Mir-15-P2c  Tgu-Mir-15-P2c  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2  Xtr-Mir-15-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(chrPic1)		 JH584720: 2500208-2500273 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACGGACAUGGAAGCAUGUCAGCAGUGCUCUAGCAGCACGUAAAUACUGGAGUUUAGGAUUGCCUAGCUGCUCUCCAGUAUUGCAUUGCUGCUUUAGUGUGGCUGGAUGGUCGUGCCCACGGCAGG
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Structure
        10          20        30        40        50        60  
CACGGACAUGGAAGCAUG--|    A UG  CU       CGUA          UUUAGGAUU 
                    UCAGC G  CU  AGCAGCA    AAUACUGGAG         G
                    GGUCG U  GA  UCGUCGU    UUAUGACCUC         C
GGACGGCACCCGUGCUGGUA^    G GU  UU       UACG          UCGUCGAUC 
    120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-15-P2c_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGUAAAUACUGGAG -22
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Star sequence

Cpi-Mir-15-P2c_3p* (predicted)
mirBase accessionNone
Sequence 
44- CCAGUAUUGCAUUGCUGCUUUA -66
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