MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-15-P2c

Family name MIR-15 (all species)
Seed AGCAGCG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-503
Paralogues Hsa-Mir-15-P1a  Hsa-Mir-15-P1b  Hsa-Mir-15-P1c  Hsa-Mir-15-P1d  Hsa-Mir-15-P2a  Hsa-Mir-15-P2b  Hsa-Mir-15-P2d 
Orthologues Aca-Mir-15-P2c  Ami-Mir-15-P2c  Bta-Mir-15-P2c  Cfa-Mir-15-P2c  Cin-Mir-15-P2  Cli-Mir-15-P2c  Cmi-Mir-15-P2c  Cpi-Mir-15-P2c  Cpo-Mir-15-P2c  Dno-Mir-15-P2c  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2  Ete-Mir-15-P2c  Gga-Mir-15-P2c  Gja-Mir-15-P2c  Lch-Mir-15-P2c  Loc-Mir-15-P2c  Mdo-Mir-15-P2c-v1  Mdo-Mir-15-P2c-v2  Mml-Mir-15-P2c  Mmu-Mir-15-P2c  Mun-Mir-15-P2c  Oan-Mir-15-P2c  Ocu-Mir-15-P2c  Pbv-Mir-15-P2c  Rno-Mir-15-P2c3  Rno-Mir-15-P2c4  Sha-Mir-15-P2c-v1  Sha-Mir-15-P2c-v2  Spt-Mir-15-P2c  Tgu-Mir-15-P2c  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2  Xtr-Mir-15-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(hg38)
chrX: 134546331-134546393 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2c)
Mir-450-P3 chrX: 134540195-134540252 [-] UCSC Ensembl
Mir-450-P2 chrX: 134540358-134540414 [-] UCSC Ensembl
Mir-450-P1 chrX: 134540529-134540585 [-] UCSC Ensembl
Mir-542-v1 chrX: 134541364-134541422 [-] UCSC Ensembl
Mir-542-v2 chrX: 134541365-134541421 [-] UCSC Ensembl
Mir-15-P2c chrX: 134546331-134546393 [-] UCSC Ensembl
Mir-15-P1c chrX: 134546643-134546701 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGACGCGGUGCCCGCGCUCAGCCGUGCCCUAGCAGCGGGAACAGUUCUGCAGUGAGCGAUCGGUGCUCUGGGGUAUUGUUUCCGCUGCCAGGGUAAGUCUGGGACUGCCGUUCGGGCCUACC
Get precursor sequence
Structure
        10          20        30        40        50        60 
GAGACGCGGUGCCCGCG--|    CCG      A              U  G   UGAGCGA 
                   CUCAG   UGCCCU GCAGCGGGAACAGU CU CAG       \
                   GGGUC   AUGGGA CGUCGCCUUUGUUA GG GUC       U
CCAUCCGGGCUUGCCGUCA^    UGA      C              U  G   UCGUGGC 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-15-P2c_5p

mirBase accessionMIMAT0002874
Sequence
0- UAGCAGCGGGAACAGUUCUGCAG -23
Get sequence
Proposed targets microrna.org: MIMAT0002874
TargetScanVert: hsa-miR-503-5p
miRDB: MIMAT0002874
Star sequence

Hsa-Mir-15-P2c_3p*

mirBase accessionMIMAT0022925
Sequence
40- GGGGUAUUGUUUCCGCUGCCAGG -63
Get sequence
Proposed targets TargetScanVert: hsa-miR-503-3p
miRDB: MIMAT0022925