MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-15-P2a

Family name MIR-15 (all species)
Seed AGCAGCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-16-1
Paralogues Hsa-Mir-15-P1a  Hsa-Mir-15-P1b  Hsa-Mir-15-P1c  Hsa-Mir-15-P1d  Hsa-Mir-15-P2b  Hsa-Mir-15-P2c  Hsa-Mir-15-P2d 
Orthologues Ami-Mir-15-P2a  Bta-Mir-15-P2a  Cfa-Mir-15-P2a  Cin-Mir-15-P2  Cja-Mir-15-P2a  Cli-Mir-15-P2a  Cmi-Mir-15-P2a  Cpi-Mir-15-P2a  Cpo-Mir-15-P2a  Dno-Mir-15-P2a  Dre-Mir-15-P2a1  Dre-Mir-15-P2a2  Eca-Mir-15-P2a  Ete-Mir-15-P2a  Gga-Mir-15-P2a  Gja-Mir-15-P2a  Gmo-Mir-15-P2a2  Laf-Mir-15-P2a  Lch-Mir-15-P2a  Loc-Mir-15-P2a  Mal-Mir-15-P2a2  Mdo-Mir-15-P2a  Mml-Mir-15-P2a  Mmr-Mir-15-P2a  Mmu-Mir-15-P2a  Mun-Mir-15-P2a  Neu-Mir-15-P2a  Oan-Mir-15-P2a  Ocu-Mir-15-P2a  Pab-Mir-15-P2a  Pbv-Mir-15-P2a  Rno-Mir-15-P2a  Sha-Mir-15-P2a  Spt-Mir-15-P2a  Sto-Mir-15-P2a  Tgu-Mir-15-P2a  Tni-Mir-15-P2a2  Xla-Mir-15-P2a3  Xla-Mir-15-P2a4  Xtr-Mir-15-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(hg38)
chr13: 50048984-50049048 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2a)
Mir-15-P2a chr13: 50048984-50049048 [-] UCSC Ensembl
Mir-15-P1a chr13: 50049130-50049188 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCUUAUGAUAGCAAUGUCAGCAGUGCCUUAGCAGCACGUAAAUAUUGGCGUUAAGAUUCUAAAAUUAUCUCCAGUAUUAACUGUGCUGCUGAAGUAAGGUUGACCAUACUCUACAGUUGUGUU
Get precursor sequence
Structure
        10          20        30         40        50        60 
GCUCUUAUGAUAGCAAU--      AG   C          -| A        CGUUAAGAUU 
                   GUCAGC  UGC UUAGCAGCAC GU AAUAUUGG          C
                   CAGUUG  AUG AGUCGUCGUG CA UUAUGACC          U
UUGUGUUGACAUCUCAUAC      GA   A          U^ A        UCUAUUAAAA 
   120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-15-P2a_5p

mirBase accessionMIMAT0000069
Sequence
0- UAGCAGCACGUAAAUAUUGGCG -22
Get sequence
Proposed targets microrna.org: MIMAT0000069
TargetScanVert: hsa-miR-16-5p
TargetMiner: hsa-miR-16-5p
miRDB: MIMAT0000069
Star sequence

Hsa-Mir-15-P2a_3p*

mirBase accessionMIMAT0004489
Sequence
42- CCAGUAUUAACUGUGCUGCUGAA -65
Get sequence
Proposed targets microrna.org: MIMAT0004489
TargetScanVert: hsa-miR-16-1-3p
TargetMiner: hsa-miR-16-1-3p
miRDB: MIMAT0004489