MirGeneDB ID | Mmr-Mir-15-P2a |
Family name |
MIR-15 (all species) |
Seed |
AGCAGCA |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
Mmr-Mir-15-P1a
Mmr-Mir-15-P1b
Mmr-Mir-15-P1c
Mmr-Mir-15-P1d
Mmr-Mir-15-P2b
Mmr-Mir-15-P2c
Mmr-Mir-15-P2d
|
Orthologues |
Ami-Mir-15-P2a
Bta-Mir-15-P2a
Cfa-Mir-15-P2a
Cin-Mir-15-P2
Cja-Mir-15-P2a
Cli-Mir-15-P2a
Cmi-Mir-15-P2a
Cpi-Mir-15-P2a
Cpo-Mir-15-P2a
Dno-Mir-15-P2a
Dre-Mir-15-P2a1
Dre-Mir-15-P2a2
Eca-Mir-15-P2a
Ete-Mir-15-P2a
Gga-Mir-15-P2a
Gja-Mir-15-P2a
Gmo-Mir-15-P2a2
Hsa-Mir-15-P2a
Laf-Mir-15-P2a
Lch-Mir-15-P2a
Loc-Mir-15-P2a
Mal-Mir-15-P2a2
Mdo-Mir-15-P2a
Mml-Mir-15-P2a
Mmu-Mir-15-P2a
Mun-Mir-15-P2a
Neu-Mir-15-P2a
Oan-Mir-15-P2a
Ocu-Mir-15-P2a
Pab-Mir-15-P2a
Pbv-Mir-15-P2a
Rno-Mir-15-P2a
Sha-Mir-15-P2a
Spt-Mir-15-P2a
Sto-Mir-15-P2a
Tgu-Mir-15-P2a
Tni-Mir-15-P2a2
Xla-Mir-15-P2a3
Xla-Mir-15-P2a4
Xtr-Mir-15-P2a
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Olfactores
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007673.1: 64040937-64041001 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCUCUUAUGACAGCAAUGUCAGCAGUGCCUUAGCAGCACGUAAAUAUUGGCGUUAAGAUUCUAAAAUUAUCUCCAGUAUUAACUGUGCUGCUGAAGUAAGGUUGGCCAUACUCUACAGUUGUAUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCUCUUAUGACAGCAAU-- AG C -| A CGUUAAGAUU
GUCAGC UGC UUAGCAGCAC GU AAUAUUGG C
CGGUUG AUG AGUCGUCGUG CA UUAUGACC U
UUAUGUUGACAUCUCAUAC GA A U^ A UCUAUUAAAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mmr-Mir-15-P2a_5p |
mirBase accession | None |
Sequence |
0- UAGCAGCACGUAAAUAUUGGCG -22
Get sequence
|
Star sequence |
Mmr-Mir-15-P2a_3p* |
mirBase accession | None |
Sequence |
42- CCAGUAUUAACUGUGCUGCUGAA -65
Get sequence
|