MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-15-P1a  Mmr-Mir-15-P1b  Mmr-Mir-15-P1c  Mmr-Mir-15-P1d  Mmr-Mir-15-P2a  Mmr-Mir-15-P2c  Mmr-Mir-15-P2d 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cja-Mir-15-P2b  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Eca-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Laf-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Neu-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pab-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007661.1: 53189860-53189924 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUAGAUGGACUGACAUACUUGUUCCACUCUAGCAGCACGUAAAUAUUGGUGUAGUGAAAUAAAUAUUAAACACCAAUAUUAUUGUGCUGCUUUAGUGUGACAGGGAUAUAGCAACUAUCAUUUC
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Structure
        10          20        30        40        50        60  
UUUAGAUGGACUGACAUA--|    UC    CU         UA           AGUGAAAU 
                    CUUGU  CACU  AGCAGCACG  AAUAUUGGUGU        \
                    GGACA  GUGA  UCGUCGUGU  UUAUAACCACA        A
CUUUACUAUCAACGAUAUAG^    GU    UU         UA           AAUUAUAA 
   120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-15-P2b_5p

mirBase accessionNone
Sequence
0- UAGCAGCACGUAAAUAUUGGUGU -23
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Star sequence

Mmr-Mir-15-P2b_3p* (predicted)

mirBase accessionNone
Sequence
42- ACCAAUAUUAUUGUGCUGCUUUA -65
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