MirGeneDB 2.1
MirGeneDB ID

Cli-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-16a-2
Paralogues Cli-Mir-15-P1a  Cli-Mir-15-P1b  Cli-Mir-15-P1c  Cli-Mir-15-P2a  Cli-Mir-15-P2c 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(colLiv2)		 scaffold258: 1615804-1615868 [+]
Clustered miRNAs
(< 50kb from Mir-15-P2b)		 Mir-15-P1b scaffold258: 1615632-1615691 [+]
Mir-15-P2b scaffold258: 1615804-1615868 [+]
Precursor
(pre-Mir +30nt flank)
AAUAGAAGAGUUGUCAUACUUGUUCCGCCCUAGCAGCACGUAAAUAUUGGUGUAGUAAAAUAAACCUUAAACCCCAAUAUUAUUGUGCUGCUUAAGCGUGGCAGAGAUUCAGCAACUCCUUUAUG
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Structure
        10          20        30        40        50        60  
AAUAGAAGAGUUGUCAUAC--|   UC   CCU         UA        U  AGUAAAAU 
                     UUGU  CGC   AGCAGCACG  AAUAUUGG GU        \
                     GACG  GCG   UCGUCGUGU  UUAUAACC CA        A
GUAUUUCCUCAACGACUUAGA^   GU   AAU         UA        C  AAUUCCAA 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-15-P2b_5p
mirBase accessionMIMAT0038416
Sequence 
0- UAGCAGCACGUAAAUAUUGGUGU -23
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Star sequence

Cli-Mir-15-P2b_3p*
mirBase accessionMIMAT0038418
Sequence 
42- CCCAAUAUUAUUGUGCUGCUUAA -65
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