MirGeneDB 2.1
MirGeneDB ID

Tgu-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-16b
Paralogues Tgu-Mir-15-P1a  Tgu-Mir-15-P1b  Tgu-Mir-15-P1c  Tgu-Mir-15-P2a  Tgu-Mir-15-P2c 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(TaeGut1_add)		 9: 23954584-23954647 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2b)		 Mir-15-P2b 9: 23954584-23954647 [-] UCSC Ensembl
Mir-15-P1b 9: 23954743-23954802 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCUGCAGGACUCGUGCUCGUUCCGCCCUAGCAGCACGUAAAUAUUGGAGUGUCAAAGAAACCUUCAACCCCAAUAUUAUUGUGCUGCUUCAGCGUGGCAGAGACUCAGCAACUGGGGCUGC
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Structure
        10         20         30        40        50        60 
CUGCCUGCAGGACUCGUG-   -| UC   CCU         UA        A  GUCAAAG 
                   CUC GU  CGC   AGCAGCACG  AAUAUUGG GU       A
                   GAG CG  GCG   UCGUCGUGU  UUAUAACC CA       A
CGUCGGGGUCAACGACUCA   A^ GU   ACU         UA        C  ACUUCCA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-15-P2b_5p
mirBase accessionMIMAT0014588
Sequence 
0- UAGCAGCACGUAAAUAUUGGAGU -23
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Star sequence

Tgu-Mir-15-P2b_3p*
mirBase accessionMIMAT0014648
Sequence 
41- CCCAAUAUUAUUGUGCUGCUUCA -64
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