MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-15-P2b2

Family name MIR-15 (all species)
Seed AGCAGCA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-15-P1a3  Xla-Mir-15-P1a4  Xla-Mir-15-P1b1  Xla-Mir-15-P1b2  Xla-Mir-15-P1c1  Xla-Mir-15-P1c2  Xla-Mir-15-P2a3  Xla-Mir-15-P2a4  Xla-Mir-15-P2b1  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cja-Mir-15-P2b  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Eca-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Laf-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmr-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Neu-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pab-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xtr-Mir-15-P2b 
Node of Origin (locus) X. laevis
Node of Origin (family) Olfactores
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030733.1: 95597523-95597582 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCCCAUCAGUUAACCUAUUUGCUCCACAUUAGCAGCACGUAAAUAUUGGGUGGUAUGAUAUGGAGCCCCAGUGUUAUUGUGCUGCUUAAGUGUGGCAAAGAUCCUGCACCAGUGUUCUA
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Structure
        10          20        30        40        50         
CCCCCAUCAGUUAACCUA--|    UC   AUU         UA         UGGUAUG 
                    UUUGC  CAC   AGCAGCACG  AAUAUUGGG       A
                    AAACG  GUG   UCGUCGUGU  UUGUGACCC       U
AUCUUGUGACCACGUCCUAG^    GU   AAU         UA         CGAGGUA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-15-P2b2_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGUAAAUAUUGGGU -22
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Star sequence

Xla-Mir-15-P2b2_3p* (predicted)
mirBase accessionNone
Sequence 
37- CCCAGUGUUAUUGUGCUGCUUAA -60
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