MirGeneDB 3.0
MirGeneDB ID

Spt-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues Spt-Mir-15-P1a  Spt-Mir-15-P1b  Spt-Mir-15-P1c  Spt-Mir-15-P2a  Spt-Mir-15-P2c 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cja-Mir-15-P2b  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Eca-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Laf-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmr-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Neu-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pab-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)		 QEPC01014905.1: 2949560-2949615 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUAGAAGAAUUCCCAUACUUGUUCCGCCCUAGCAGCACGUAAAUAUUGGUGUAGUAAUAAACCCCAAUAUUAUUGUGCUGCUUAAGCGUGGCAGAGAUUCAGCAACUUGUUUAUC
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Structure
        10          20        30        40        50       
AGUAGAAGAAUUCCCAUAC--|   UC   CCU         UA        U UAGU 
                     UUGU  CGC   AGCAGCACG  AAUAUUGG G    A
                     GACG  GCG   UCGUCGUGU  UUAUAACC C    A
CUAUUUGUUCAACGACUUAGA^   GU   AAU         UA        C AAAU 
    110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Spt-Mir-15-P2b_5p (predicted)
mirBase accessionNone
Sequence 
0- UAGCAGCACGUAAAUAUUGGUG -22
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Star sequence

Spt-Mir-15-P2b_3p* (predicted)
mirBase accessionNone
Sequence 
34- CCAAUAUUAUUGUGCUGCUUAA -56
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