MirGeneDB 2.1
MirGeneDB ID

Spt-Mir-15-P1a

Family name MIR-15 (all species)
Seed AGCAGCA
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues Spt-Mir-15-P1b  Spt-Mir-15-P1c  Spt-Mir-15-P2a  Spt-Mir-15-P2b  Spt-Mir-15-P2c 
Orthologues Ami-Mir-15-P1a  Bta-Mir-15-P1a  Cfa-Mir-15-P1a  Cin-Mir-15-P1  Cli-Mir-15-P1a  Cmi-Mir-15-P1a  Cpi-Mir-15-P1a  Cpo-Mir-15-P1a  Dno-Mir-15-P1a  Dre-Mir-15-P1a1  Dre-Mir-15-P1a2  Ete-Mir-15-P1a  Gga-Mir-15-P1a  Gja-Mir-15-P1a  Gmo-Mir-15-P1a2  Hsa-Mir-15-P1a  Lch-Mir-15-P1a  Loc-Mir-15-P1a  Mal-Mir-15-P1a2  Mdo-Mir-15-P1a  Mml-Mir-15-P1a  Mmu-Mir-15-P1a  Mun-Mir-15-P1a  Oan-Mir-15-P1a  Ocu-Mir-15-P1a  Rno-Mir-15-P1a  Sha-Mir-15-P1a  Sto-Mir-15-P1a  Tgu-Mir-15-P1a  Tni-Mir-15-P1a2  Xla-Mir-15-P1a3  Xla-Mir-15-P1a4  Xtr-Mir-15-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)		 QEPC01014606.1: 2611600-2611658 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUUUAAAGAUUGACACCUUGAGAUAAUGUAGCAGCACAUAAUGGUUUGUGGGUUUUGAAAAGGUGCAGGCCAUAUUGUGCUGCUUCAAAAAUACAAGGAUUUCAUCCUGGUGAAAAG
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Structure
        10          20        30        40        50         
CCUUUUAAAGAUUGACA--|    AGAUAA  U         UA         GGGUUUU 
                   CCUUG      UG AGCAGCACA  AUGGUUUGU       \
                   GGAAC      AC UCGUCGUGU  UACCGGACG       G
GAAAAGUGGUCCUACUUUA^    AUAAAA  U         UA         UGGAAAA 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Spt-Mir-15-P1a_5p (predicted)
mirBase accessionNone
Sequence 
0- UAGCAGCACAUAAUGGUUUGUG -22
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Star sequence

Spt-Mir-15-P1a_3p* (predicted)
mirBase accessionNone
Sequence 
37- CAGGCCAUAUUGUGCUGCUUCA -59
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