MirGeneDB 3.0
MirGeneDB ID

Spt-Mir-15-P2c

Family name MIR-15 (all species)
Seed AGCAGCA
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues Spt-Mir-15-P1a  Spt-Mir-15-P1b  Spt-Mir-15-P1c  Spt-Mir-15-P2a  Spt-Mir-15-P2b 
Orthologues Aca-Mir-15-P2c  Ami-Mir-15-P2c  Bta-Mir-15-P2c  Cfa-Mir-15-P2c  Cin-Mir-15-P2  Cja-Mir-15-P2c  Cli-Mir-15-P2c  Cmi-Mir-15-P2c  Cpi-Mir-15-P2c  Cpo-Mir-15-P2c  Dno-Mir-15-P2c  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2  Eca-Mir-15-P2c  Ete-Mir-15-P2c  Gga-Mir-15-P2c  Gja-Mir-15-P2c  Hsa-Mir-15-P2c  Laf-Mir-15-P2c  Lch-Mir-15-P2c  Loc-Mir-15-P2c  Mdo-Mir-15-P2c-v1  Mdo-Mir-15-P2c-v2  Mml-Mir-15-P2c  Mmr-Mir-15-P2c  Mmu-Mir-15-P2c  Mun-Mir-15-P2c  Neu-Mir-15-P2c-v1  Neu-Mir-15-P2c-v2  Oan-Mir-15-P2c  Ocu-Mir-15-P2c  Pab-Mir-15-P2c  Pbv-Mir-15-P2c  Rno-Mir-15-P2c3  Rno-Mir-15-P2c4  Sha-Mir-15-P2c-v1  Sha-Mir-15-P2c-v2  Tgu-Mir-15-P2c  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2  Xtr-Mir-15-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)		 QEPC01011901.1: 25030450-25030513 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCCACGCAGAUGUUCUUGUCCGCAUGCUGUAGCAGCACGUAAAUACUGGAGUACGGGAUCGCCUAGACUCUCCAGUAUUGCAUUGCUGCUUUAGUUUGGCUGGAUCUUGGUGACAACAGCAGG
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Structure
        10        20          30        40        50        60 
UCCCACGCAGAUGUUCUU    -  AU-|   U       CGUA          UACGGGAU 
                  GUCC GC   GCUG AGCAGCA    AAUACUGGAG        C
                  UAGG CG   UGAU UCGUCGU    UUAUGACCUC        G
GGACGACAACAGUGGUUC    U  GUU^   U       UACG          UCAGAUCC 
  120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Spt-Mir-15-P2c_5p (predicted)
mirBase accessionNone
Sequence 
0- UAGCAGCACGUAAAUACUGGAG -22
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Star sequence

Spt-Mir-15-P2c_3p* (predicted)
mirBase accessionNone
Sequence 
42- CCAGUAUUGCAUUGCUGCUUUA -64
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