MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-15-P2c

Family name MIR-15 (all species)
Seed AGCAGCG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-15-P1a  Laf-Mir-15-P1b  Laf-Mir-15-P1c  Laf-Mir-15-P1d  Laf-Mir-15-P2a  Laf-Mir-15-P2b  Laf-Mir-15-P2d 
Orthologues Aca-Mir-15-P2c  Ami-Mir-15-P2c  Bta-Mir-15-P2c  Cfa-Mir-15-P2c  Cin-Mir-15-P2  Cja-Mir-15-P2c  Cli-Mir-15-P2c  Cmi-Mir-15-P2c  Cpi-Mir-15-P2c  Cpo-Mir-15-P2c  Dno-Mir-15-P2c  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2  Eca-Mir-15-P2c  Ete-Mir-15-P2c  Gga-Mir-15-P2c  Gja-Mir-15-P2c  Hsa-Mir-15-P2c  Lch-Mir-15-P2c  Loc-Mir-15-P2c  Mdo-Mir-15-P2c-v1  Mdo-Mir-15-P2c-v2  Mml-Mir-15-P2c  Mmr-Mir-15-P2c  Mmu-Mir-15-P2c  Mun-Mir-15-P2c  Neu-Mir-15-P2c-v1  Neu-Mir-15-P2c-v2  Oan-Mir-15-P2c  Ocu-Mir-15-P2c  Pab-Mir-15-P2c  Pbv-Mir-15-P2c  Rno-Mir-15-P2c3  Rno-Mir-15-P2c4  Sha-Mir-15-P2c-v1  Sha-Mir-15-P2c-v2  Spt-Mir-15-P2c  Tgu-Mir-15-P2c  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2  Xtr-Mir-15-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010127.1: 4463094-4463154 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGGCGCGGGCCCGCUCUCAGCCGUGCCCUAGCAGCGGGAACAGUACUGCAGCGGGCGCUCGGCUCUGGAGUAUUGUUGCCGCUGCCCGGGCAAGGCUGGGACUCUGCACAGGCCGCCCG
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Structure
        10          20        30        40        50          
GGGGGCGCGGGCCCGCU--|      G     UA       G         G   CGGGCG 
                   CUCAGCC UGCCC  GCAGCGG AACAGUACU CAG      \
                   GGGUCGG ACGGG  CGUCGCC UUGUUAUGA GUC      C
GCCCGCCGGACACGUCUCA^      A     CC       G         G   UCGGCU 
 .       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Mature sequence

Laf-Mir-15-P2c_5p (predicted)
mirBase accessionNone
Sequence 
0- UAGCAGCGGGAACAGUACUGCAG -23
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Star sequence

Laf-Mir-15-P2c_3p*
mirBase accessionNone
Sequence 
38- GGAGUAUUGUUGCCGCUGCCCGG -61
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