MirGeneDB ID | Neu-Mir-15-P2c-v1 |
---|---|
Family name | MIR-15 (all species) |
Seed | AGCAGCA |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-15-P1a Neu-Mir-15-P1c Neu-Mir-15-P1d Neu-Mir-15-P2a Neu-Mir-15-P2b Neu-Mir-15-P2c-v2 Neu-Mir-15-P2d |
Orthologues | Aca-Mir-15-P2c Ami-Mir-15-P2c Bta-Mir-15-P2c Cfa-Mir-15-P2c Cin-Mir-15-P2 Cja-Mir-15-P2c Cli-Mir-15-P2c Cmi-Mir-15-P2c Cpi-Mir-15-P2c Cpo-Mir-15-P2c Dno-Mir-15-P2c Dre-Mir-15-P2c-v1 Dre-Mir-15-P2c-v2 Eca-Mir-15-P2c Ete-Mir-15-P2c Gga-Mir-15-P2c Gja-Mir-15-P2c Hsa-Mir-15-P2c Laf-Mir-15-P2c Lch-Mir-15-P2c Loc-Mir-15-P2c Mdo-Mir-15-P2c-v1 Mdo-Mir-15-P2c-v2 Mml-Mir-15-P2c Mmr-Mir-15-P2c Mmu-Mir-15-P2c Mun-Mir-15-P2c Oan-Mir-15-P2c Ocu-Mir-15-P2c Pab-Mir-15-P2c Pbv-Mir-15-P2c Rno-Mir-15-P2c3 Rno-Mir-15-P2c4 Sha-Mir-15-P2c-v1 Sha-Mir-15-P2c-v2 Spt-Mir-15-P2c Tgu-Mir-15-P2c Xla-Mir-15-P2c1 Xla-Mir-15-P2c2 Xtr-Mir-15-P2c |
Node of Origin (locus) | Gnathostomata |
Node of Origin (family) | Olfactores |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 56572368-56572428 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | AGGACUCCCAGUUUAAGCUCGGCUGUGCCCUAGCAGCACGUCAAAACUGGAGUUAACUGGUUAAAUCCUCCAGUAUUGCCUUGCUGCUUGAGCGAGGUAGGAGCCUGGUUCAAUUGCCCCUGet precursor sequence |
Structure | 10 20 30 40 50 AGGACUCCCAGUUUAAG- G-| G CCU CGU A UUAACUG CUC GCU UGC AGCAGCA CAA ACUGGAG \ GAG UGG GCG UCGUCGU GUU UGACCUC G UCCCCGUUAACUUGGUCC GA^ A AGU UCC A CUAAAUU . 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Mature sequence | Neu-Mir-15-P2c-v1_5p |
mirBase accession | None |
Sequence |
0- UAGCAGCACGUCAAAACUGGAG -22
Get sequence
|
Star sequence | Neu-Mir-15-P2c-v1_3p* (predicted) |
mirBase accession | None |
Sequence |
39- CCAGUAUUGCCUUGCUGCUUGA -61
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|