| MirGeneDB ID | Neu-Mir-15-P1d |
|---|---|
| Family name | MIR-15 (all species) |
| Seed | AGCAGCA |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-15-P1a Neu-Mir-15-P1c Neu-Mir-15-P2a Neu-Mir-15-P2b Neu-Mir-15-P2c-v1 Neu-Mir-15-P2c-v2 Neu-Mir-15-P2d |
| Orthologues | Ami-Mir-15-P1d Bta-Mir-15-P1d Cfa-Mir-15-P1d Cin-Mir-15-P1 Cja-Mir-15-P1d Cpo-Mir-15-P1d Dno-Mir-15-P1d Dre-Mir-15-P1d Eca-Mir-15-P1d Ete-Mir-15-P1d Hsa-Mir-15-P1d Laf-Mir-15-P1d Loc-Mir-15-P1d Mdo-Mir-15-P1d Mml-Mir-15-P1d Mmr-Mir-15-P1d Mmu-Mir-15-P1d Oan-Mir-15-P1d Ocu-Mir-15-P1d Pab-Mir-15-P1d Rno-Mir-15-P1d Sha-Mir-15-P1d Sto-Mir-15-P1d |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Olfactores |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051814.1: 78980473-78980534 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUACCCCAAAUCCCAUCCUGCCUCCGCCCCAGCAGCACACUGUGGUUUGUUCAGUGUUGUGGCCAAGUCCAAACCACACUGUGGUGUUAGAGUGAGGGUAGGCGAGGCAUCGAAACCACCAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCUACCCCAAAUCCCAU--| UC CCC G C UUCAGUGUU CCUGCC CGC AGCA CACA UGUGGUUUG G GGAUGG GUG UUGU GUGU ACACCAAAC U ACCACCAAAGCUACGGAGC^ GA AGA G C CUGAACCGG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Neu-Mir-15-P1d_5p |
| mirBase accession | None |
| Sequence |
0- CAGCAGCACACUGUGGUUUGUU -22
Get sequence
|
| Star sequence | Neu-Mir-15-P1d_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- CAAACCACACUGUGGUGUUAGA -62
Get sequence
|
