MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-15-P1d

Family name MIR-15 (all species)
Seed AGCAGCA
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-15b
Paralogues Dre-Mir-15-P1a1  Dre-Mir-15-P1a2  Dre-Mir-15-P1b  Dre-Mir-15-P2a1  Dre-Mir-15-P2a2  Dre-Mir-15-P2b  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2  Dre-Mir-15-P2d 
Orthologues Ami-Mir-15-P1d  Bta-Mir-15-P1d  Cfa-Mir-15-P1d  Cin-Mir-15-P1  Cja-Mir-15-P1d  Cpo-Mir-15-P1d  Dno-Mir-15-P1d  Eca-Mir-15-P1d  Ete-Mir-15-P1d  Hsa-Mir-15-P1d  Laf-Mir-15-P1d  Loc-Mir-15-P1d  Mdo-Mir-15-P1d  Mml-Mir-15-P1d  Mmr-Mir-15-P1d  Mmu-Mir-15-P1d  Neu-Mir-15-P1d  Oan-Mir-15-P1d  Ocu-Mir-15-P1d  Pab-Mir-15-P1d  Rno-Mir-15-P1d  Sha-Mir-15-P1d  Sto-Mir-15-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(danRer11)		 chr7: 26070912-26070973 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1d)		 Mir-15-P1d chr7: 26070912-26070973 [+] UCSC Ensembl
Mir-15-P2d chr7: 26071436-26071500 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUCUUUUUAUUUAGCCCUGAGUGCCCUGUAGCAGCACAUCAUGGUUUGUAAGUUAUAAGGGCAAAUUCCGAAUCAUGAUGUGCUGUCACUGGGAGCCUGGGAGUUUCUCCAUUAACAUGA
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Structure
        10          20        30        40        50        60
UCAUCUUUUUAUUUAGC--|  GA  G   U  AG                 UAAGUUAUA 
                   CCU  GU CCC GU  CAGCACAUCAUGGUUUG         A
                   GGG  CG GGG CA  GUCGUGUAGUACUAAGC         G
AGUACAAUUACCUCUUUGA^  UC  A   U  CU                 CUUAAACGG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-15-P1d_5p
mirBase accessionMIMAT0001773
Sequence 
0- UAGCAGCACAUCAUGGUUUGUA -22
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Proposed targets TargetScanFish: dre-miR-15b
Star sequence

Dre-Mir-15-P1d_3p*
mirBase accessionMIMAT0031936
Sequence 
40- CGAAUCAUGAUGUGCUGUCACU -62
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