MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-15-P2d

Family name MIR-15 (all species)
Seed AGCAGCA
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-457a
Paralogues Dre-Mir-15-P1a1  Dre-Mir-15-P1a2  Dre-Mir-15-P1b  Dre-Mir-15-P1d  Dre-Mir-15-P2a1  Dre-Mir-15-P2a2  Dre-Mir-15-P2b  Dre-Mir-15-P2c-v1  Dre-Mir-15-P2c-v2 
Orthologues Aca-Mir-15-P2d  Ami-Mir-15-P2d  Bta-Mir-15-P2d  Cfa-Mir-15-P2d  Cin-Mir-15-P2  Cja-Mir-15-P2d  Cpo-Mir-15-P2d  Dno-Mir-15-P2d  Eca-Mir-15-P2d  Ete-Mir-15-P2d  Gja-Mir-15-P2d  Hsa-Mir-15-P2d  Laf-Mir-15-P2d  Loc-Mir-15-P2d  Mal-Mir-15-P2d  Mdo-Mir-15-P2d  Mml-Mir-15-P2d  Mmr-Mir-15-P2d  Mmu-Mir-15-P2d  Neu-Mir-15-P2d  Oan-Mir-15-P2d  Ocu-Mir-15-P2d  Pab-Mir-15-P2d  Rno-Mir-15-P2d  Sha-Mir-15-P2d  Sto-Mir-15-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(danRer11)		 chr7: 26071436-26071500 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2d)		 Mir-15-P1d chr7: 26070912-26070973 [+] UCSC Ensembl
Mir-15-P2d chr7: 26071436-26071500 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACCACUUGAUGCCUCAGUGUGCCUGACAGAAGCAGCACAUCAAUAUUGGCAGCUGCCCUCUCUCUGGGUUGCCAGUAUGGUUUGUGCUGCUCCCGUCAGACAGACACACUCAGCGAUCCUCCAG
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Structure
        10          20        30        40         50        60 
GACCACUUGAUGCCUCA--  G  C     AGA         UCA-|        GCUGCCCU 
                   GU UG CUGAC   AGCAGCACA    AUAUUGGCA        C
                   CA AC GACUG   UCGUCGUGU    UAUGACCGU        U
GACCUCCUAGCGACUCACA  G  A     CCC         UUGG^        UGGGUCUC 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-15-P2d_5p
mirBase accessionMIMAT0001883
Sequence 
0- AAGCAGCACAUCAAUAUUGGCA -22
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Proposed targets TargetScanFish: dre-miR-457a
Star sequence

Dre-Mir-15-P2d_3p*
mirBase accessionNone
Sequence 
42- CCAGUAUGGUUUGUGCUGCUCCC -65
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