Mir-15-P2d

MirGeneDB ID

Oan-Mir-15-P2d

Family name

MIR-15 (all species)

Seed

AGCAGCA

Species

Platypus (Ornithorhynchus anatinus)

MiRBase ID

Paralogues

Oan-Mir-15-P1a Oan-Mir-15-P1b Oan-Mir-15-P1c Oan-Mir-15-P1d Oan-Mir-15-P2a Oan-Mir-15-P2b Oan-Mir-15-P2c

Orthologues

Aca-Mir-15-P2d Ami-Mir-15-P2d Bta-Mir-15-P2d Cfa-Mir-15-P2d Cin-Mir-15-P2 Cja-Mir-15-P2d Cpo-Mir-15-P2d Dno-Mir-15-P2d Dre-Mir-15-P2d Eca-Mir-15-P2d Ete-Mir-15-P2d Gja-Mir-15-P2d Hsa-Mir-15-P2d Laf-Mir-15-P2d Loc-Mir-15-P2d Mal-Mir-15-P2d Mdo-Mir-15-P2d Mml-Mir-15-P2d Mmr-Mir-15-P2d Mmu-Mir-15-P2d Neu-Mir-15-P2d Ocu-Mir-15-P2d Pab-Mir-15-P2d Rno-Mir-15-P2d Sha-Mir-15-P2d Sto-Mir-15-P2d

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Olfactores

Genome context
(mOrnAna1.p.v1_plustraces)

NC_041753.1: 7279566-7279631 [+]

Precursor
(pre-Mir +30nt flank)

CCCCACCCCCGGCCGGGGCCGCCCCGCCUCUAGCAGCACAGAAAUAUUGGCCCUCGUGGGGUUUGGACCCUGGCCAGUAUUCGUUGUGCUGCCCCAGGCGGGGCGGUGCGAGCAGCGGGGGACCCC

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Structure

        10          20        30        40         50        60  
CCCCACCCCCGGCCGGG--            CUA         A-|         CUCGUGGGG 
                   GCCGCCCCGCCU   GCAGCACAG  AAUAUUGGCC         \
                   UGGCGGGGCGGA   CGUCGUGUU  UUAUGACCGG         U
CCCCAGGGGGCGACGAGCG            CCC         GC^         UCCCAGGUU 
    120       110       100        90        80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Br	Ce	He	Ki	Te

Mature sequence

Oan-Mir-15-P2d_5p

mirBase accession

None

Sequence

0- UAGCAGCACAGAAAUAUUGGCC -22

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Star sequence

Oan-Mir-15-P2d_3p*

mirBase accession

None

Sequence

43- CCAGUAUUCGUUGUGCUGCCCCA -66

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