MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-15-P2d

Family name MIR-15 (all species)
Seed AGCAGCA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-195
Paralogues Mmr-Mir-15-P1a  Mmr-Mir-15-P1b  Mmr-Mir-15-P1c  Mmr-Mir-15-P1d  Mmr-Mir-15-P2a  Mmr-Mir-15-P2b  Mmr-Mir-15-P2c 
Orthologues Aca-Mir-15-P2d  Ami-Mir-15-P2d  Bta-Mir-15-P2d  Cfa-Mir-15-P2d  Cin-Mir-15-P2  Cja-Mir-15-P2d  Cpo-Mir-15-P2d  Dno-Mir-15-P2d  Dre-Mir-15-P2d  Eca-Mir-15-P2d  Ete-Mir-15-P2d  Gja-Mir-15-P2d  Hsa-Mir-15-P2d  Laf-Mir-15-P2d  Loc-Mir-15-P2d  Mal-Mir-15-P2d  Mdo-Mir-15-P2d  Mml-Mir-15-P2d  Mmu-Mir-15-P2d  Neu-Mir-15-P2d  Oan-Mir-15-P2d  Ocu-Mir-15-P2d  Pab-Mir-15-P2d  Rno-Mir-15-P2d  Sha-Mir-15-P2d  Sto-Mir-15-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007676.1: 56050021-56050081 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2d)		 Mir-15-P1d CM007676.1: 56049701-56049762 [+] UCSC Ensembl
Mir-15-P2d CM007676.1: 56050021-56050081 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGUUGCCCACACCCAGCUUCCCUGGCUCUAGCAGCACAGAAAUAUUGGCACUGGGAAGCCAAUCUGCCAAUAUUGGCUGUGCUGCUCCAGGCAGGGUGGCGAGAGCUACUCAGGGCUGA
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Structure
        10          20        30        40         50         
UUUGUUGCCCACACCCA--   U     G  CU          A-|         CUGGGA 
                   GCU CCCUG CU  AGCAGCACAG  AAUAUUGGCA      A
                   CGG GGGAC GA  UCGUCGUGUC  UUAUAACCGU      G
AGUCGGGACUCAUCGAGAG   U     G  CC          GG^         CUAACC 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-15-P2d_5p
mirBase accessionMIMAT0049233
Sequence 
0- UAGCAGCACAGAAAUAUUGGCA -22
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Star sequence

Mmr-Mir-15-P2d_3p*
mirBase accessionNone
Sequence 
38- CCAAUAUUGGCUGUGCUGCUCCA -61
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