Mir-15-P1b

MirGeneDB ID

Mmr-Mir-15-P1b

Family name

MIR-15 (all species)

Seed

AGCAGCA

Species

Gray mouse lemur (Microcebus murinus)

MiRBase ID

Paralogues

Mmr-Mir-15-P1a Mmr-Mir-15-P1c Mmr-Mir-15-P1d Mmr-Mir-15-P2a Mmr-Mir-15-P2b Mmr-Mir-15-P2c Mmr-Mir-15-P2d

Orthologues

Aca-Mir-15-P1b Ami-Mir-15-P1b Bta-Mir-15-P1b Cfa-Mir-15-P1b Cin-Mir-15-P1 Cja-Mir-15-P1b Cli-Mir-15-P1b Cmi-Mir-15-P1b Cpi-Mir-15-P1b Cpo-Mir-15-P1b Dno-Mir-15-P1b Dre-Mir-15-P1b Eca-Mir-15-P1b Ete-Mir-15-P1b Gga-Mir-15-P1b Gja-Mir-15-P1b Gmo-Mir-15-P1b Hsa-Mir-15-P1b Laf-Mir-15-P1b Lch-Mir-15-P1b Loc-Mir-15-P1b Mal-Mir-15-P1b Mml-Mir-15-P1b Mmu-Mir-15-P1b Mun-Mir-15-P1b Oan-Mir-15-P1b Ocu-Mir-15-P1b Pab-Mir-15-P1b Pbv-Mir-15-P1b Rno-Mir-15-P1b Sha-Mir-15-P1b Spt-Mir-15-P1b Sto-Mir-15-P1b Tgu-Mir-15-P1b Tni-Mir-15-P1b Xla-Mir-15-P1b1 Xla-Mir-15-P1b2 Xtr-Mir-15-P1b

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Olfactores

Genome context
(GCA_000165445.3_Mmur_3.0_genomic)

CM007661.1: 53190012-53190071 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AUCCUGUAUUUUUGAGGCCUUAAAGUACUGUAGCAGCACAUCAUGGUUUACAUACUACAGUCAAGAUGCGAAUCAUUAUUUGCUGCUUUAGAAAUUUAAGGAAAUUCAUUCAAAACUAUA

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Structure

        10          20        30        40        50         
AUCCUGUAUUUUUGAGG--|      GUA   U       C  C      UA  UACUAC 
                   CCUUAAA   CUG AGCAGCA AU AUGGUU  CA      A
                   GGAAUUU   GAU UCGUCGU UA UACUAA  GU      G
AUAUCAAAACUUACUUAAA^      AAA   U       U  U      GC  AGAACU 
.       110       100        90        80        70        60

Deep sequencing

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3' NTU

Motifs

Tissue expression

Mi	Mi	Mi	Mi	Mi	Mi	Mi	Mi

Mature sequence

Mmr-Mir-15-P1b_5p

mirBase accession

None

Sequence

0- UAGCAGCACAUCAUGGUUUACA -22

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Star sequence

Mmr-Mir-15-P1b_3p*

mirBase accession

None

Sequence

38- CGAAUCAUUAUUUGCUGCUUUA -60

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