MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-15-P1b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-15a
Paralogues Aca-Mir-15-P1c  Aca-Mir-15-P2b  Aca-Mir-15-P2c  Aca-Mir-15-P2d 
Orthologues Ami-Mir-15-P1b  Bta-Mir-15-P1b  Cfa-Mir-15-P1b  Cin-Mir-15-P1  Cja-Mir-15-P1b  Cli-Mir-15-P1b  Cmi-Mir-15-P1b  Cpi-Mir-15-P1b  Cpo-Mir-15-P1b  Dno-Mir-15-P1b  Dre-Mir-15-P1b  Eca-Mir-15-P1b  Ete-Mir-15-P1b  Gga-Mir-15-P1b  Gja-Mir-15-P1b  Gmo-Mir-15-P1b  Hsa-Mir-15-P1b  Laf-Mir-15-P1b  Lch-Mir-15-P1b  Loc-Mir-15-P1b  Mal-Mir-15-P1b  Mml-Mir-15-P1b  Mmr-Mir-15-P1b  Mmu-Mir-15-P1b  Mun-Mir-15-P1b  Oan-Mir-15-P1b  Ocu-Mir-15-P1b  Pab-Mir-15-P1b  Pbv-Mir-15-P1b  Rno-Mir-15-P1b  Sha-Mir-15-P1b  Spt-Mir-15-P1b  Sto-Mir-15-P1b  Tgu-Mir-15-P1b  Tni-Mir-15-P1b  Xla-Mir-15-P1b1  Xla-Mir-15-P1b2  Xtr-Mir-15-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(anoCar2)		 3: 13039125-13039184 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1b)		 Mir-15-P2b 3: 13038975-13039038 [-] UCSC Ensembl
Mir-15-P1b 3: 13039125-13039184 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUCUUACGUUUUGGAAGCUUUAAAGUACUCUAGCAGCACAUCAUGAUUUGUAUGUCAUAGUAAAUAUGCAAGUCAUUAUUUGCUGCUUUAGAAUUUUAAAGAAGAGAAUCAGUUGAAAUU
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Structure
        10          20        30        40        50         
GUCUUACGUUUUGGAAG--|        A  CU       C  C          UGUCAU 
                   CUUUAAAGU CU  AGCAGCA AU AUGAUUUGUA      A
                   GAAAUUUUA GA  UCGUCGU UA UACUGAACGU      G
UUAAAGUUGACUAAGAGAA^        A  UU       U  U          AUAAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-15-P1b_5p
mirBase accessionMIMAT0021792
Sequence 
0- UAGCAGCACAUCAUGAUUUGUA -22
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Star sequence

Aca-Mir-15-P1b_3p*
mirBase accessionMIMAT0021793
Sequence 
38- CAAGUCAUUAUUUGCUGCUUUA -60
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