MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-15-P1b

Family name MIR-15 (all species)
Seed AGCAGCG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-15-P1a2  Mal-Mir-15-P2a2  Mal-Mir-15-P2b  Mal-Mir-15-P2d 
Orthologues Aca-Mir-15-P1b  Ami-Mir-15-P1b  Bta-Mir-15-P1b  Cfa-Mir-15-P1b  Cin-Mir-15-P1  Cja-Mir-15-P1b  Cli-Mir-15-P1b  Cmi-Mir-15-P1b  Cpi-Mir-15-P1b  Cpo-Mir-15-P1b  Dno-Mir-15-P1b  Dre-Mir-15-P1b  Eca-Mir-15-P1b  Ete-Mir-15-P1b  Gga-Mir-15-P1b  Gja-Mir-15-P1b  Gmo-Mir-15-P1b  Hsa-Mir-15-P1b  Laf-Mir-15-P1b  Lch-Mir-15-P1b  Loc-Mir-15-P1b  Mml-Mir-15-P1b  Mmr-Mir-15-P1b  Mmu-Mir-15-P1b  Mun-Mir-15-P1b  Oan-Mir-15-P1b  Ocu-Mir-15-P1b  Pab-Mir-15-P1b  Pbv-Mir-15-P1b  Rno-Mir-15-P1b  Sha-Mir-15-P1b  Spt-Mir-15-P1b  Sto-Mir-15-P1b  Tgu-Mir-15-P1b  Tni-Mir-15-P1b  Xla-Mir-15-P1b1  Xla-Mir-15-P1b2  Xtr-Mir-15-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884855.1: 161876-161936 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUGCCCUCUGCCAGCCCUUAGACUGCUAUAGCAGCGCAUCAUGGUUUGAAACAUUGCGGAAAAGGUGCGAACCAUUAUUUGCUGCUUUAGAAUUUUAAGGGAAAAAAGCAUUUUUACCC
Get precursor sequence
Structure
        10          20        30        40        50          
AUGUGCCCUCUGCCAGC--|      CUG   U       C  C        AAACAUUGC 
                   CCUUAGA   CUA AGCAGCG AU AUGGUUUG         \
                   GGAAUUU   GAU UCGUCGU UA UACCAAGC         G
CCCAUUUUUACGAAAAAAG^      UAA   U       U  U        GUGGAAAAG 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-15-P1b_5p
mirBase accessionNone
Sequence 
0- UAGCAGCGCAUCAUGGUUUGAA -22
Get sequence
Star sequence

Mal-Mir-15-P1b_3p*
mirBase accessionNone
Sequence 
39- CGAACCAUUAUUUGCUGCUUUA -61
Get sequence