MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-15-P1b1

Family name MIR-15 (all species)
Seed AGCAGCA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-15-P1a3  Xla-Mir-15-P1a4  Xla-Mir-15-P1b2  Xla-Mir-15-P1c1  Xla-Mir-15-P1c2  Xla-Mir-15-P2a3  Xla-Mir-15-P2a4  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xla-Mir-15-P2c1  Xla-Mir-15-P2c2 
Orthologues Aca-Mir-15-P1b  Ami-Mir-15-P1b  Bta-Mir-15-P1b  Cfa-Mir-15-P1b  Cin-Mir-15-P1  Cja-Mir-15-P1b  Cli-Mir-15-P1b  Cmi-Mir-15-P1b  Cpi-Mir-15-P1b  Cpo-Mir-15-P1b  Dno-Mir-15-P1b  Dre-Mir-15-P1b  Eca-Mir-15-P1b  Ete-Mir-15-P1b  Gga-Mir-15-P1b  Gja-Mir-15-P1b  Gmo-Mir-15-P1b  Hsa-Mir-15-P1b  Laf-Mir-15-P1b  Lch-Mir-15-P1b  Loc-Mir-15-P1b  Mal-Mir-15-P1b  Mml-Mir-15-P1b  Mmr-Mir-15-P1b  Mmu-Mir-15-P1b  Mun-Mir-15-P1b  Oan-Mir-15-P1b  Ocu-Mir-15-P1b  Pab-Mir-15-P1b  Pbv-Mir-15-P1b  Rno-Mir-15-P1b  Sha-Mir-15-P1b  Spt-Mir-15-P1b  Sto-Mir-15-P1b  Tgu-Mir-15-P1b  Tni-Mir-15-P1b  Xtr-Mir-15-P1b 
Node of Origin (locus) X. laevis
Node of Origin (family) Olfactores
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030732.1: 111710768-111710827 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAUUGUUGUUGAAUGUCCUAAAGAAGUGUAGCAGCACAUCAUGAUUUGCAUGCUGUAUCAGAGAUUCUAAUCAUUAUUUGCUGCUUCAUUAUAUUGGGGAAAAUCUAUCGACUUGUGC
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Structure
        10          20        30        40        50         
GAAAUUGUUGUUGAAUG--|     AGA    U       C  C      UGCAUGCUGU 
                   UCCUAA   AGUG AGCAGCA AU AUGAUU          A
                   GGGGUU   UUAC UCGUCGU UA UACUAA          U
CGUGUUCAGCUAUCUAAAA^     AUA    U       U  U      UCUUAGAGAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-15-P1b1_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACAUCAUGAUUUGCA -22
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Co-mature sequence

Xla-Mir-15-P1b1_3p
mirBase accessionNone
Sequence 
38- CUAAUCAUUAUUUGCUGCUUCA -60
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