MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-15-P1a2  Mal-Mir-15-P1b  Mal-Mir-15-P2a2  Mal-Mir-15-P2d 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884855.1: 161639-161703 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCUCCCUUUCCCAUAUACCUGCCACGCUUUAGCAGCACGUAAAUAUUGGUGUGUGACAAUAGACCCCAACCCCAAUAUUAGCAGUGCUGCUUCAGUGUGGCUGGAUCAAACACCUUCCAUUUCC
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Structure
        10          20        30         40        50        60 
CCCUCCCUUUCCCAUAUA--  U        UU        -| A        U UGUGACAA 
                    CC GCCACGCU  AGCAGCAC GU AAUAUUGG G        U
                    GG CGGUGUGA  UCGUCGUG CG UUAUAACC C        A
CCUUUACCUUCCACAAACUA  U        CU        A^ A        C AACCCCAG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-15-P2b_5p

mirBase accessionNone
Sequence
0- UAGCAGCACGUAAAUAUUGGUG -22
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Star sequence

Mal-Mir-15-P2b_3p*

mirBase accessionNone
Sequence
41- CCCAAUAUUAGCAGUGCUGCUUCA -65
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