Mir-15-P2b

MirGeneDB ID

Mun-Mir-15-P2b

Family name

MIR-15 (all species)

Seed

AGCAGCA

Species

Microcaecilia (Microcaecilia unicolor)

MiRBase ID

Paralogues

Mun-Mir-15-P1a Mun-Mir-15-P1b Mun-Mir-15-P1c Mun-Mir-15-P2a Mun-Mir-15-P2c

Orthologues

Aca-Mir-15-P2b Ami-Mir-15-P2b Bta-Mir-15-P2b Cfa-Mir-15-P2b Cin-Mir-15-P2 Cja-Mir-15-P2b Cli-Mir-15-P2b Cmi-Mir-15-P2b Cpi-Mir-15-P2b Cpo-Mir-15-P2b Dno-Mir-15-P2b Dre-Mir-15-P2b Eca-Mir-15-P2b Ete-Mir-15-P2b Gga-Mir-15-P2b Gja-Mir-15-P2b Gmo-Mir-15-P2b Hsa-Mir-15-P2b Laf-Mir-15-P2b Lch-Mir-15-P2b Loc-Mir-15-P2b Mal-Mir-15-P2b Mdo-Mir-15-P2b Mml-Mir-15-P2b Mmr-Mir-15-P2b Mmu-Mir-15-P2b Neu-Mir-15-P2b Oan-Mir-15-P2b Ocu-Mir-15-P2b Pab-Mir-15-P2b Pbv-Mir-15-P2b Rno-Mir-15-P2b Sha-Mir-15-P2b Spt-Mir-15-P2b Sto-Mir-15-P2b Tgu-Mir-15-P2b Tni-Mir-15-P2b Xla-Mir-15-P2b1 Xla-Mir-15-P2b2 Xtr-Mir-15-P2b

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Olfactores

Genome context
(Mun_miRNA_loci)

15-P2b_LR594641.1:189222004-189222268: 101-165 [+]

Precursor
(pre-Mir +30nt flank)

GGAUAAGAGAAUGUCAUACUUGUUCCGCAUUAGCAGCACGUAAAUAUUGGUGUAGUAAAGUAAAUAUUAAACCCCAAUGUUGUUGUGCUGCUUAAGCGUGGCAAGAAUUCAGCAGCUUUUUUUUU

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Structure

        10          20        30        40        50        60  
GGAUAAGAGAAUGUCAUA--|    UC   AUU         UA        U UAGUAAAGU 
                    CUUGU  CGC   AGCAGCACG  AAUAUUGG G         \
                    GAACG  GCG   UCGUCGUGU  UUGUAACC C         A
UUUUUUUUUCGACGACUUAA^    GU   AAU         UG        C AAAUUAUAA 
   120       110       100        90        80        70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

To

Mature sequence

Mun-Mir-15-P2b_5p

mirBase accession

None

Sequence

0- UAGCAGCACGUAAAUAUUGGUG -22

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Star sequence

Mun-Mir-15-P2b_3p*

mirBase accession

None

Sequence

43- CCAAUGUUGUUGUGCUGCUUAA -65

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