MirGeneDB 3.0

MirGeneDB ID

Mun-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-15-P1a  Mun-Mir-15-P1b  Mun-Mir-15-P1c  Mun-Mir-15-P2a  Mun-Mir-15-P2c 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cja-Mir-15-P2b  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Eca-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Laf-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmr-Mir-15-P2b  Mmu-Mir-15-P2b  Neu-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pab-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(Mun_miRNA_loci)
15-P2b_LR594641.1:189222004-189222268: 101-165 [+]
Precursor
(pre-Mir +30nt flank)
GGAUAAGAGAAUGUCAUACUUGUUCCGCAUUAGCAGCACGUAAAUAUUGGUGUAGUAAAGUAAAUAUUAAACCCCAAUGUUGUUGUGCUGCUUAAGCGUGGCAAGAAUUCAGCAGCUUUUUUUUU
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Structure
        10          20        30        40        50        60  
GGAUAAGAGAAUGUCAUA--|    UC   AUU         UA        U UAGUAAAGU 
                    CUUGU  CGC   AGCAGCACG  AAUAUUGG G         \
                    GAACG  GCG   UCGUCGUGU  UUGUAACC C         A
UUUUUUUUUCGACGACUUAA^    GU   AAU         UG        C AAAUUAUAA 
   120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Mun-Mir-15-P2b_5p

mirBase accessionNone
Sequence
0- UAGCAGCACGUAAAUAUUGGUG -22
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Star sequence

Mun-Mir-15-P2b_3p*

mirBase accessionNone
Sequence
43- CCAAUGUUGUUGUGCUGCUUAA -65
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