MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-15-P2d

Family name MIR-15 (all species)
Seed AGCAGCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-15-P1a2  Mal-Mir-15-P1b  Mal-Mir-15-P2a2  Mal-Mir-15-P2b 
Orthologues Aca-Mir-15-P2d  Ami-Mir-15-P2d  Bta-Mir-15-P2d  Cfa-Mir-15-P2d  Cin-Mir-15-P2  Cja-Mir-15-P2d  Cpo-Mir-15-P2d  Dno-Mir-15-P2d  Dre-Mir-15-P2d  Eca-Mir-15-P2d  Ete-Mir-15-P2d  Gja-Mir-15-P2d  Hsa-Mir-15-P2d  Laf-Mir-15-P2d  Loc-Mir-15-P2d  Mdo-Mir-15-P2d  Mml-Mir-15-P2d  Mmr-Mir-15-P2d  Mmu-Mir-15-P2d  Neu-Mir-15-P2d  Oan-Mir-15-P2d  Ocu-Mir-15-P2d  Pab-Mir-15-P2d  Rno-Mir-15-P2d  Sha-Mir-15-P2d  Sto-Mir-15-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884713.1: 2957540-2957602 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUGAGGCUAGAGGUCAGUGUGUCAGGCUGUAGCAGCACAUCAUUACUGGUAUUCCUUCUCUCUGCAUUGCUGGUAUGAUAUGUGCUGCUCCUAUCAGACACACUCUUCUUCAUCAGCAUCUU
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Structure
        10          20            30        40          50        60
GUUGAGGCUAGAGGUCA--       ----|  CUGU         --    U  UG   UUCCUUC 
                   GUGUGUC    AGG    AGCAGCACA  UCAU AC  GUA       U
                   CACACAG    UCC    UCGUCGUGU  AGUA UG  CGU       C
UUCUACGACUACUUCUUCU       ACUA^  ----         AU    -  GU   UACGUCU 
 120       110       100            90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-15-P2d_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACAUCAUUACUGGUA -22
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Star sequence

Mal-Mir-15-P2d_3p*
mirBase accessionNone
Sequence 
40- CUGGUAUGAUAUGUGCUGCUCCU -63
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