MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-15-P2d

Family name MIR-15 (all species)
Seed AGCAGCA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-195
Paralogues Cfa-Mir-15-P1a  Cfa-Mir-15-P1b  Cfa-Mir-15-P1c  Cfa-Mir-15-P1d  Cfa-Mir-15-P2a  Cfa-Mir-15-P2b  Cfa-Mir-15-P2c 
Orthologues Aca-Mir-15-P2d  Ami-Mir-15-P2d  Bta-Mir-15-P2d  Cin-Mir-15-P2  Cja-Mir-15-P2d  Cpo-Mir-15-P2d  Dno-Mir-15-P2d  Dre-Mir-15-P2d  Eca-Mir-15-P2d  Ete-Mir-15-P2d  Gja-Mir-15-P2d  Hsa-Mir-15-P2d  Laf-Mir-15-P2d  Loc-Mir-15-P2d  Mal-Mir-15-P2d  Mdo-Mir-15-P2d  Mml-Mir-15-P2d  Mmr-Mir-15-P2d  Mmu-Mir-15-P2d  Neu-Mir-15-P2d  Oan-Mir-15-P2d  Ocu-Mir-15-P2d  Pab-Mir-15-P2d  Rno-Mir-15-P2d  Sha-Mir-15-P2d  Sto-Mir-15-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(canFam3_add)		 chr5: 32045450-32045510 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2d)		 Mir-15-P2d chr5: 32045450-32045510 [-] UCSC Ensembl
Mir-15-P1d chr5: 32045764-32045825 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGUUGCCCACACCCAGCUCCCCUGGCUCUAGCAGCACAGAAAUAUUGGCACUGGGAAGAGAGUCUGCCAAUAUUGGCUGUGCUGCUCUAGGCAGGGUGGUGAGCACUGCGAGGAGGGGC
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Structure
        10          20        30        40         50         
UUUGUUGCCCACACCCA--  UC     G  CU          A-|         CUGGGA 
                   GC  CCCUG CU  AGCAGCACAG  AAUAUUGGCA      A
                   UG  GGGAC GA  UCGUCGUGUC  UUAUAACCGU      G
CGGGGAGGAGCGUCACGAG  GU     G  UC          GG^         CUGAGA 
 .       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-15-P2d_5p
mirBase accessionMIMAT0006692
Sequence 
0- UAGCAGCACAGAAAUAUUGGCA -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-195
miRDB: MIMAT0006692
Star sequence

Cfa-Mir-15-P2d_3p*
mirBase accessionNone
Sequence 
38- CCAAUAUUGGCUGUGCUGCUCUA -61
Get sequence