MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-15-P1a

Family name MIR-15 (all species)
Seed AGCAGCA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-15a
Paralogues Oan-Mir-15-P1b  Oan-Mir-15-P1c  Oan-Mir-15-P1d  Oan-Mir-15-P2a  Oan-Mir-15-P2b  Oan-Mir-15-P2c  Oan-Mir-15-P2d 
Orthologues Ami-Mir-15-P1a  Bta-Mir-15-P1a  Cfa-Mir-15-P1a  Cin-Mir-15-P1  Cja-Mir-15-P1a  Cli-Mir-15-P1a  Cmi-Mir-15-P1a  Cpi-Mir-15-P1a  Cpo-Mir-15-P1a  Dno-Mir-15-P1a  Dre-Mir-15-P1a1  Dre-Mir-15-P1a2  Eca-Mir-15-P1a  Ete-Mir-15-P1a  Gga-Mir-15-P1a  Gja-Mir-15-P1a  Gmo-Mir-15-P1a2  Hsa-Mir-15-P1a  Laf-Mir-15-P1a  Lch-Mir-15-P1a  Loc-Mir-15-P1a  Mal-Mir-15-P1a2  Mdo-Mir-15-P1a  Mml-Mir-15-P1a  Mmr-Mir-15-P1a  Mmu-Mir-15-P1a  Mun-Mir-15-P1a  Neu-Mir-15-P1a  Ocu-Mir-15-P1a  Pab-Mir-15-P1a  Rno-Mir-15-P1a  Sha-Mir-15-P1a  Spt-Mir-15-P1a  Sto-Mir-15-P1a  Tgu-Mir-15-P1a  Tni-Mir-15-P1a2  Xla-Mir-15-P1a3  Xla-Mir-15-P1a4  Xtr-Mir-15-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041747.1: 8171572-8171627 [+]
Clustered miRNAs
(< 50kb from Mir-15-P1a)
Mir-15-P1a NC_041747.1: 8171572-8171627 [+]
Mir-15-P2a NC_041747.1: 8171709-8171773 [+]
Precursor
(pre-Mir +30nt flank)
GAGCUAGCUUGAAGACACCUUGGGGUAAAGUAGCAGCACAUAAUGGUUUGUGAGUUUUGAAAUACAGGCCAUAUUGUGCUGCCUCAAAAAUACAAGGAUCUGAUCUUCUGAAGACA
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Structure
        10          20        30        40        50       
GAGCUAGCUUGAAGACA--|    GGGUAAAGUA        UA          AGUU 
                   CCUUG          GCAGCACA  AUGGUUUGUG    U
                   GGAAC          CGUCGUGU  UACCGGACAU    U
ACAGAAGUCUUCUAGUCUA^    AUAAAAACUC        UA          AAAG 
    110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-15-P1a_5p

mirBase accessionMIMAT0007164
Sequence
0- UAGCAGCACAUAAUGGUUUGUG -22
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Star sequence

Oan-Mir-15-P1a_3p*

mirBase accessionMIMAT0007165
Sequence
34- CAGGCCAUAUUGUGCUGCCUCA -56
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