MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-216-P2a

Family name MIR-216 (all species)
Seed AAUCUCU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-216b
Paralogues Mmu-Mir-216-P2b 
Orthologues Aae-Mir-216-P2  Aca-Mir-216-P2a  Aga-Mir-216-P2  Ami-Mir-216-P2a  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Bta-Mir-216-P2a  Cbr-Mir-216-P2  Cel-Mir-216-P2  Cfa-Mir-216-P2a  Cja-Mir-216-P2a  Cli-Mir-216-P2a  Cmi-Mir-216-P2a  Cpi-Mir-216-P2a  Cpo-Mir-216-P2a  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dno-Mir-216-P2a  Dpu-Mir-216-P2  Dre-Mir-216-P2a  Dsi-Mir-216-P2  Dya-Mir-216-P2  Ebu-Mir-216-P2a2  Eca-Mir-216-P2a  Ete-Mir-216-P2a  Gga-Mir-216-P2a  Gja-Mir-216-P2a  Gmo-Mir-216-P2a  Hme-Mir-216-P2  Hsa-Mir-216-P2a  Isc-Mir-216-P2  Laf-Mir-216-P2a  Lch-Mir-216-P2a  Loc-Mir-216-P2a  Mal-Mir-216-P2a  Mdo-Mir-216-P2a  Mml-Mir-216-P2a  Mmr-Mir-216-P2a  Neu-Mir-216-P2a  Oan-Mir-216-P2a  Ocu-Mir-216-P2a  Pab-Mir-216-P2a  Pbv-Mir-216-P2a  Pca-Mir-216-P2  Pma-Mir-216-P2a1  Pma-Mir-216-P2a2  Rno-Mir-216-P2a  Sha-Mir-216-P2a  Spt-Mir-216-P2a  Sto-Mir-216-P2a  Tca-Mir-216-P2  Tgu-Mir-216-P2a  Tni-Mir-216-P2a  Tur-Mir-216-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Nephrozoa
Genome context
(mm10)		 chr11: 28746204-28746265 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P2a)		 Mir-216-P2a chr11: 28746204-28746265 [+] UCSC Ensembl
Mir-216-P2b chr11: 28757018-28757079 [+] UCSC Ensembl
Mir-217-v2 chr11: 28763760-28763820 [+] UCSC Ensembl
Mir-217-v1 chr11: 28763761-28763819 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAGAUGUAAUUGCACAUUGGCAGACUGGGAAAUCUCUGCAGGCAAAUGUGAUGUCACUGAAGAAACCACACACUUACCUGUAGAGAUUCUUCAGUCUGACAACAUCAAGCAUCAAACCCCU
Get precursor sequence
Structure
        10          20        30        40        50        60
UUAGAUGUAAUUGCACA--|  G        GA            C  A    AUGUCACU 
                   UUG CAGACUGG  AAUCUCUGCAGG AA UGUG        G
                   AAC GUCUGACU  UUAGAGAUGUCC UU ACAC        A
UCCCCAAACUACGAACUAC^  A        UC            A  C    ACCAAAGA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-216-P2a_5p
mirBase accessionMIMAT0003729
Sequence 
0- AAAUCUCUGCAGGCAAAUGUGA -22
Get sequence
Proposed targets microrna.org: MIMAT0003729
TargetScanVert: mmu-miR-216b-5p
miRDB: MIMAT0003729
Star sequence

Mmu-Mir-216-P2a_3p*
mirBase accessionMIMAT0017233
Sequence 
40- ACACUUACCUGUAGAGAUUCUU -62
Get sequence
Proposed targets TargetScanVert: mmu-miR-216b-3p
miRDB: MIMAT0017233