MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-216-P2b

Family name MIR-216 (all species)
Seed AAUCUCA
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-216a
Paralogues Mmu-Mir-216-P2a 
Orthologues Aae-Mir-216-P2  Aca-Mir-216-P2b  Aga-Mir-216-P2  Ami-Mir-216-P2b  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Bta-Mir-216-P2b  Cbr-Mir-216-P2  Cel-Mir-216-P2  Cfa-Mir-216-P2b  Cja-Mir-216-P2b  Cli-Mir-216-P2b  Cmi-Mir-216-P2b  Cpi-Mir-216-P2b  Cpo-Mir-216-P2b  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dno-Mir-216-P2b  Dpu-Mir-216-P2  Dre-Mir-216-P2b  Dsi-Mir-216-P2  Dya-Mir-216-P2  Ebu-Mir-216-P2b1  Eca-Mir-216-P2b  Ete-Mir-216-P2b  Gga-Mir-216-P2b  Gja-Mir-216-P2b  Gmo-Mir-216-P2b  Hme-Mir-216-P2  Hsa-Mir-216-P2b  Isc-Mir-216-P2  Laf-Mir-216-P2b  Lch-Mir-216-P2b  Loc-Mir-216-P2b  Mal-Mir-216-P2b  Mdo-Mir-216-P2b  Mml-Mir-216-P2b  Mmr-Mir-216-P2b  Mun-Mir-216-P2b  Neu-Mir-216-P2b  Oan-Mir-216-P2b  Ocu-Mir-216-P2b  Pab-Mir-216-P2b  Pbv-Mir-216-P2b  Pca-Mir-216-P2  Pma-Mir-216-P2b1  Rno-Mir-216-P2b  Sha-Mir-216-P2b  Spt-Mir-216-P2b  Sto-Mir-216-P2b  Tca-Mir-216-P2  Tgu-Mir-216-P2b  Tni-Mir-216-P2b  Tur-Mir-216-P2  Xla-Mir-216-P2b3  Xla-Mir-216-P2b4  Xtr-Mir-216-P2b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Nephrozoa
Genome context
(mm10)		 chr11: 28757018-28757079 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P2b)		 Mir-216-P2a chr11: 28746204-28746265 [+] UCSC Ensembl
Mir-216-P2b chr11: 28757018-28757079 [+] UCSC Ensembl
Mir-217-v2 chr11: 28763760-28763820 [+] UCSC Ensembl
Mir-217-v1 chr11: 28763761-28763819 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGUCCAACCUGGAUGGCUAUGAGUUGGUUUAAUCUCAGCUGGCAACUGUGAGAUGUCCCUAUCAUUCCUCACAGUGGUCUCUGGGAUUAUGCUAAACAGAGCAAUUUCCUUGACCUUGUGG
Get precursor sequence
Structure
        10           20        30        40        50        60 
AGGUCCAACCUGGAUGG---| A  AG     U         CU   A        AUGUCCC 
                    CU UG  UUGGU UAAUCUCAG  GGC ACUGUGAG       \
                    GA AC  AAUCG AUUAGGGUC  CUG UGACACUC       U
GGUGUUCCAGUUCCUUUAAC^ G  A-     U         U-   G        CUUACUA 
120       110       100         90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-216-P2b_5p
mirBase accessionMIMAT0000662
Sequence 
0- UAAUCUCAGCUGGCAACUGUGAG -23
Get sequence
Proposed targets microrna.org: MIMAT0000662
TargetScanVert: mmu-miR-216a-5p
miRDB: MIMAT0000662
Star sequence

Mmu-Mir-216-P2b_3p*
mirBase accessionMIMAT0017054
Sequence 
40- CACAGUGGUCUCUGGGAUUAUG -62
Get sequence
Proposed targets TargetScanVert: mmu-miR-216a-3p
miRDB: MIMAT0017054