MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-142-P4

Family name MIR-142 (all species)
Seed AUAAAGU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-142-P4-v1  Aca-Mir-142-P4-v2  Aca-Mir-142-P4-v3  Aca-Mir-142-P4-v4  Ami-Mir-142-P4-v1  Ami-Mir-142-P4-v2  Ami-Mir-142-P4-v3  Ami-Mir-142-P4-v4  Cpi-Mir-142-P4-v1  Cpi-Mir-142-P4-v2  Cpi-Mir-142-P4-v3  Cpi-Mir-142-P4-v4  Dre-Mir-142-P4-v1  Dre-Mir-142-P4-v2  Dre-Mir-142-P4-v3  Gja-Mir-142-P4-v1  Gja-Mir-142-P4-v2  Gja-Mir-142-P4-v3  Gja-Mir-142-P4-v4  Gmo-Mir-142-P4-v1  Gmo-Mir-142-P4-v2  Gmo-Mir-142-P4-v3  Gmo-Mir-142-P4-v4  Lch-Mir-142-P4  Mal-Mir-142-P4-v1  Mal-Mir-142-P4-v2  Mal-Mir-142-P4-v3  Mal-Mir-142-P4-v4  Pbv-Mir-142-P4-v1  Pbv-Mir-142-P4-v2  Pbv-Mir-142-P4-v3  Pbv-Mir-142-P4-v4  Tni-Mir-142-P4-v1  Tni-Mir-142-P4-v2  Tni-Mir-142-P4-v3  Tni-Mir-142-P4-v4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 142-P2_LR594638.1:123466933-123467074: 42-101 [-]
Precursor
(pre-Mir +30nt flank)
AUGGCUGAUGAGACAUACAGUGGAGUCAUCCAUAAAGUAGAAAGCACUACUAAACCAUUCCAUUCAGUGUAGUGUUUCCUACUUUAUGGAUGAGUGUACUGUGGGCAUCUGAGAGGAUUG
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Structure
        10          20        30        40        50         
AUGGCUGAUGAGACAUA--|    GAG               A         UAAACCAU 
                   CAGUG   UCAUCCAUAAAGUAG AAGCACUAC        U
                   GUCAU   AGUAGGUAUUUCAUC UUUGUGAUG        C
GUUAGGAGAGUCUACGGGU^    GUG               C         UGACUUAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Mun-Mir-142-P4_5p (predicted)
mirBase accessionNone
Sequence 
0- CAUAAAGUAGAAAGCACUACUA -22
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Star sequence

Mun-Mir-142-P4_3p*
mirBase accessionNone
Sequence 
38- GUAGUGUUUCCUACUUUAUGGA -60
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