MirGeneDB 3.0
32 microRNA genes of family MIR-1677
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Aca-Mir-1677-o1 aca-mir-1677a MIR-1677 GACUUCA None MIMAT0021796 5 15152952 15153008 + A. carolinensis Diapsida Unknown
Ami-Mir-1677-o3 ami-mir-1677a MIR-1677 CUUCACU None MIMAT0038319 NW_017714194.1 18734785 18734846 + A. mississippiensis Diapsida Unknown
Ami-Mir-1677-o4 ami-mir-1677b MIR-1677 CCAGAGC MIMAT0038320 MIMAT0038321 NW_017713709.1 4406472 4406529 - A. mississippiensis Diapsida No
Ami-Mir-1677-o5 ami-mir-1677c MIR-1677 GACCCAG MIMAT0038322 MIMAT0038323 NW_017714221.1 1818128 1818190 + A. mississippiensis Diapsida No
Cpi-Mir-1677-o6 cpi-mir-1677a MIR-1677 UGACUUC MIMAT0037920 MIMAT0037921 JH584713 4439235 4439298 - C. picta Diapsida No
Cpi-Mir-1677-o7 cpi-mir-1677b MIR-1677 CCAGAGC MIMAT0037922 MIMAT0037923 JH584649 363127 363184 - C. picta Diapsida No 1
Cpi-Mir-1677-o8 cpi-mir-1677h MIR-1677 CUAAAUU MIMAT0037932 MIMAT0037933 JH584557 925315 925376 + C. picta Diapsida No 1
Tgu-Mir-1677-P1 tgu-mir-1677 MIR-1677 UGACUUC MIMAT0014452 MIMAT0026959 3 38376375 38376431 - Archelosauria Diapsida No 1
Gga-Mir-1677-P1 gga-mir-1677 MIR-1677 UGACUUC MIMAT0007562 MIMAT0007563 3 73971343 73971399 + Archelosauria Diapsida No 1
Cli-Mir-1677-P1 cli-mir-1677 MIR-1677 UGACUUC MIMAT0038691 MIMAT0038692 scaffold1299 480160 480216 + Archelosauria Diapsida No 1
Cpi-Mir-1677-P1a1 cpi-mir-1677g-1 MIR-1677 GACUUCA None MIMAT0037931 JH584677 2397667 2397724 + C. picta Diapsida No
Cpi-Mir-1677-P1a2 cpi-mir-1677g-1 MIR-1677 GACUUCA None MIMAT0037931 JH584677 2398652 2398709 + C. picta Diapsida No
Cpi-Mir-1677-P1b cpi-mir-1677g-2 MIR-1677 GACUUCA None MIMAT0037931 JH584486 3339783 3339839 + C. picta Diapsida No
Tgu-Mir-1677-P2 None MIR-1677 CUUUAAU None None 8 13816352 13816413 - Archelosauria Diapsida Unknown 1 1
Gga-Mir-1677-P2 gga-mir-1620 MIR-1677 CUUUAAU None MIMAT0007487 8 18847863 18847924 + Archelosauria Diapsida No 1 1
Cpi-Mir-1677-P2 None MIR-1677 UUUGAAU None None JH584734 2192414 2192475 + Archelosauria Diapsida Unknown
Cli-Mir-1677-P2 None MIR-1677 CUUUAAU None None scaffold309 1394353 1394414 + Archelosauria Diapsida Unknown 1 1
Gga-Mir-1677-P3 gga-mir-1744 MIR-1677 CUUCAAC MIMAT0007648 MIMAT0007649 10 10362855 10362917 + G. gallus Diapsida No
Tgu-Mir-1677-P4 tgu-mir-1784 MIR-1677 GACUUAA MIMAT0026960 MIMAT0014457 3 82428447 82428504 + Archelosauria Diapsida No
Gga-Mir-1677-P4 gga-mir-1784 MIR-1677 UGACUUA MIMAT0007696 None 3 35727117 35727174 + Archelosauria Diapsida No
Cpi-Mir-1677-P4 cpi-mir-1784 MIR-1677 UCUGCUC None MIMAT0037935 JH584713 3364024 3364081 - Archelosauria Diapsida Unknown
Cli-Mir-1677-P4 cli-mir-1784 MIR-1677 GACUUAA MIMAT0038699 None scaffold232 10503091 10503148 - Archelosauria Diapsida No
Tgu-Mir-1677-P5 tgu-mir-1803 MIR-1677 UUGACUU MIMAT0026965 MIMAT0014472 2 94474915 94474969 + Neognathae Diapsida No
Gga-Mir-1677-P5 gga-mir-1803 MIR-1677 UUGACUU None MIMAT0007720 2 92556457 92556510 + Neognathae Diapsida No
Cli-Mir-1677-P5 cli-mir-1803-1 MIR-1677 UUGACUU MIMAT0038703 MIMAT0038704 scaffold173 2790627 2790680 + Neognathae Diapsida No
Tgu-Mir-1677-P6 None MIR-1677 UGACUUA None None 2 85363381 85363438 + Neognathae Diapsida No
Gga-Mir-1677-P6 None MIR-1677 UGACUUA None None 2 83618413 83618470 + Neognathae Diapsida No
Cli-Mir-1677-P6 None MIR-1677 UGACUUA None None scaffold231 75600 75657 + Neognathae Diapsida No
Spt-Mir-1677-P7 None MIR-1677 CCAAAGC None None QEPC01009472.1 17400820 17400877 - Lepidosauria Diapsida Unknown 1 1 1
Pbv-Mir-1677-P7 None MIR-1677 GACUUCA None None KE956408.1 78934 78991 - Lepidosauria Diapsida No 1 1 1
Gja-Mir-1677-P7 None MIR-1677 CCAAAGC None None NW_015182825.1 1335 1392 - Lepidosauria Diapsida No 1 1 1
Aca-Mir-1677-P7 aca-mir-1677b MIR-1677 CCAAAGC MIMAT0021797 MIMAT0021798 GL343197.1 2025980 2026037 + Lepidosauria Diapsida No 1 1 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all