Mir
Gene
DB
2.1
Home
Browse
Search
Download
Information
54 microRNA genes of family MIR-3
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
▼
CNNC
Dpu-Mir-3
None
MIR-3
CACUGGG
None
None
DAPPUscaffold_24
361462
361522
-
Pancrustacea
Pancrustacea
No
1
1
Hme-Mir-3-P14
None
MIR-3
CACUGGG
None
None
HE671859
113699
113757
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P15
None
MIR-3
CACUGGG
None
None
HE671859
113451
113508
-
H. melpomene
Pancrustacea
No
1
1
Hme-Mir-3-P16
None
MIR-3
CACUGGG
None
None
HE671859
113306
113364
-
H. melpomene
Pancrustacea
No
1
1
Hme-Mir-3-P18
None
MIR-3
CACUGGG
None
None
HE671859
112729
112787
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P19
None
MIR-3
CACUGGG
None
None
HE671859
112455
112513
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P21
None
MIR-3
CACUGGG
None
None
HE671859
112176
112234
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P22
None
MIR-3
CACUGGU
None
None
HE671859
111736
111797
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P25
None
MIR-3
CACUGGG
None
None
HE671859
110796
110850
-
H. melpomene
Pancrustacea
No
1
Dma-Mir-3
None
MIR-3
CACUGGG
None
None
NC_046174.1
2509456
2509516
+
Pancrustacea
Pancrustacea
No
1
Dmo-Mir-3-P1
dmo-mir-3
MIR-3
CACUGGG
None
MIMAT0008668
scaffold_6496
20936995
20937055
-
Drosophila
Pancrustacea
No
Dme-Mir-3-P1
dme-mir-3
MIR-3
CACUGGG
MIMAT0020784
MIMAT0000108
2R
19661600
19661656
-
Drosophila
Pancrustacea
No
1
Dsi-Mir-3-P1
dsi-mir-3
MIR-3
CACUGGG
None
MIMAT0008862
2R
16151447
16151503
-
Drosophila
Pancrustacea
No
1
Dya-Mir-3-P1
dya-mir-3
MIR-3
CACUGGG
None
MIMAT0009074
2R
13623628
13623684
+
Drosophila
Pancrustacea
No
1
Dan-Mir-3-P1
dan-mir-3
MIR-3
CACUGGG
None
MIMAT0008423
scaffold_13266
9731233
9731293
+
Drosophila
Pancrustacea
No
1
1
Dmo-Mir-3-P2
dmo-mir-309
MIR-3
CACUGGG
None
MIMAT0008660
scaffold_6496
20937123
20937187
-
Drosophila
Pancrustacea
No
Dme-Mir-3-P2
dme-mir-309
MIR-3
CACUGGG
MIMAT0020835
MIMAT0000401
2R
19661710
19661768
-
Drosophila
Pancrustacea
No
Dsi-Mir-3-P2
dsi-mir-309
MIR-3
CACUGGG
None
MIMAT0008894
2R
16151557
16151615
-
Drosophila
Pancrustacea
No
Dya-Mir-3-P2
dya-mir-309
MIR-3
CACUGGG
None
MIMAT0009085
2R
13623513
13623571
+
Drosophila
Pancrustacea
No
Dan-Mir-3-P2
dan-mir-309
MIR-3
CACUGGG
None
MIMAT0008453
scaffold_13266
9731119
9731176
+
Drosophila
Pancrustacea
No
1
1
Dmo-Mir-3-P3
dmo-mir-318
MIR-3
CACUGGG
None
MIMAT0008684
scaffold_6540
5225350
5225408
+
Drosophila
Pancrustacea
No
1
Dme-Mir-3-P3
dme-mir-318
MIR-3
CACUGGG
MIMAT0020844
MIMAT0000410
3R
10408308
10408365
+
Drosophila
Pancrustacea
No
1
Dsi-Mir-3-P3
dsi-mir-318
MIR-3
CACUGGG
None
MIMAT0008907
3R
14842658
14842715
-
Drosophila
Pancrustacea
No
1
Dya-Mir-3-P3
dya-mir-318
MIR-3
CACUGGG
None
MIMAT0009079
3R
10262545
10262602
+
Drosophila
Pancrustacea
No
1
Dan-Mir-3-P3
dan-mir-318
MIR-3
CACUGGG
None
MIMAT0008463
scaffold_13340
867217
867275
-
Drosophila
Pancrustacea
No
1
Tca-Mir-3-P4
tca-mir-309a
MIR-3
GAUGAAC
MIMAT0018750
MIMAT0018751
LG5
7455958
7456014
+
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P5
tca-mir-309b
MIR-3
CACUGGG
MIMAT0018886
MIMAT0018887
LG5
7457453
7457508
+
T. castaneum
Pancrustacea
No
1
1
Tca-Mir-3-P6
tca-mir-309c
MIR-3
CACUGGG
MIMAT0045526
MIMAT0045527
LG5
7457335
7457391
+
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P8
None
MIR-3
CACUGGG
None
None
LG2
1143938
1143997
+
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P10
None
MIR-3
CACUGGG
None
None
LG2
1144355
1144413
+
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P11
None
MIR-3
GGUCUAU
None
None
LG2
1140475
1140533
+
T. castaneum
Pancrustacea
No
Hme-Mir-3-P17
None
MIR-3
CACUGGG
None
None
HE671859
113173
113233
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P20
None
MIR-3
CACUGGG
None
None
HE671859
112283
112342
-
H. melpomene
Pancrustacea
No
Hme-Mir-3-P23
None
MIR-3
UAGUCAU
None
None
HE671859
111487
111543
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P24
None
MIR-3
CACUGGG
None
None
HE671859
110937
110990
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P26
None
MIR-3
CACUGGG
None
None
HE671859
110635
110693
-
H. melpomene
Pancrustacea
No
Hme-Mir-3-P27
hme-mir-2733
MIR-3
CACUGGG
None
MIMAT0024951
HE671859
110477
110535
-
H. melpomene
Pancrustacea
Unknown
Tca-Mir-3-P9a
None
MIR-3
CACUGGG
None
None
LG2
342886
342945
-
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P12a
None
MIR-3
CACUGGG
None
None
KQ972170
29279
29337
+
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P13a
None
MIR-3
CACUGGG
None
None
LG2
1145669
1145727
+
T. castaneum
Pancrustacea
No
1
Aae-Mir-3-P2a1
aae-mir-309a-1
MIR-3
CACUGGG
None
MIMAT0014272
supercont1.602
94041
94109
+
A. aegypti
Pancrustacea
No
1
Aae-Mir-3-P2a2
aae-mir-309a-2
MIR-3
CACUGGG
None
MIMAT0014272
supercont1.150
907891
907959
+
A. aegypti
Pancrustacea
No
1
Aae-Mir-3-P2b
aae-mir-309b
MIR-3
CACUGGG
MIMAT0014319
MIMAT0014320
supercont1.464
825634
825696
+
A. aegypti
Pancrustacea
Unknown
1
Tca-Mir-3-P9b
None
MIR-3
CACUGGG
None
None
KQ971812
4156
4215
-
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P12b
None
MIR-3
CACUGGG
None
None
KQ972170
8053
8111
-
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P13b
None
MIR-3
CACUGGG
None
None
LG2
1141776
1141834
+
T. castaneum
Pancrustacea
No
1
Tca-Mir-3-P7-v1
None
MIR-3
CACUGGG
None
None
LG2
364450
364510
-
T. castaneum
Pancrustacea
No
1
Bge-Mir-3-P29-v1
None
MIR-3
CACUGGG
None
None
KZ614999.1
54531
54589
-
B. germanica
Pancrustacea
No
1
Bge-Mir-3-P28a-v1
None
MIR-3
CACUGGG
None
None
KZ618317.1
56244
56302
-
B. germanica
Pancrustacea
No
1
Bge-Mir-3-P28b-v1
None
MIR-3
CACUGGG
None
None
KZ614999.1
53646
53704
-
B. germanica
Pancrustacea
No
1
Tca-Mir-3-P7-v2
None
MIR-3
ACUGGGC
None
None
LG2
364450
364510
-
T. castaneum
Pancrustacea
No
1
Bge-Mir-3-P29-v2
None
MIR-3
UCACUGG
None
None
KZ614999.1
54531
54589
-
B. germanica
Pancrustacea
No
1
Bge-Mir-3-P28a-v2
None
MIR-3
UCACUGG
None
None
KZ618317.1
56244
56302
-
B. germanica
Pancrustacea
No
1
Bge-Mir-3-P28b-v2
None
MIR-3
UCACUGG
None
None
KZ614999.1
53646
53704
-
B. germanica
Pancrustacea
No
1
Download sequences for:
precursor
|
5p
|
3p
|
mature
|
star
|
mature/star
|
loop
|
extend_pre
|
all