MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-17-P4a2

Family name MIR-17 (all species)
Seed AAAGUGC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-17-P1a1  Mal-Mir-17-P1a2  Mal-Mir-17-P1d  Mal-Mir-17-P2a2a  Mal-Mir-17-P2a2b  Mal-Mir-17-P4a1  Mal-Mir-17-P4c  Mal-Mir-17-P4d 
Orthologues Aca-Mir-17-P4a  Ami-Mir-17-P4a  Bta-Mir-17-P4a  Cfa-Mir-17-P4a  Cja-Mir-17-P4a  Cli-Mir-17-P4a  Cmi-Mir-17-P4a  Cpi-Mir-17-P4a  Cpo-Mir-17-P4a  Dno-Mir-17-P4a  Dre-Mir-17-P4a2  Eca-Mir-17-P4a  Ete-Mir-17-P4a  Gga-Mir-17-P4a  Gja-Mir-17-P4a  Gmo-Mir-17-P4a2  Hsa-Mir-17-P4a  Laf-Mir-17-P4a  Lch-Mir-17-P4a  Loc-Mir-17-P4a  Mdo-Mir-17-P4a  Mml-Mir-17-P4a  Mmr-Mir-17-P4a  Mmu-Mir-17-P4a  Mun-Mir-17-P4a  Neu-Mir-17-P4a  Ocu-Mir-17-P4a  Pab-Mir-17-P4a  Pbv-Mir-17-P4a  Rno-Mir-17-P4a  Sha-Mir-17-P4a  Spt-Mir-17-P4a  Sto-Mir-17-P4a  Tgu-Mir-17-P4a  Tni-Mir-17-P4a2  Xtr-Mir-17-P4a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884718.1: 1737279-1737339 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAUAUCAUAAGGACAGGUUUCAGUAGUAUUAAAGUGCUUAUAGUGCAGGUAGUUUUUAUGAAAUUCUACUGCAUUGUGAGCACUUAAAGUACUUCUAGAUGCGAGUCUCUGCAUGGAAAA
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Structure
        10         20         30         40        50          
UUAUAUCAUAAGGACAG-  U  -  U      A-|                G   UUUUUA 
                  GU UC AG AGUAUU  AAGUGCUUAUAGUGCAG UAG      \
                  CG AG UC UCAUGA  UUCACGAGUGUUACGUC AUC      U
AAAAGGUACGUCUCUGAG  U  A  U      AA^                -   UUAAAG 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-17-P4a2_5p
mirBase accessionNone
Sequence 
0- UAAAGUGCUUAUAGUGCAGGUAG -23
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Star sequence

Mal-Mir-17-P4a2_3p*
mirBase accessionNone
Sequence 
38- ACUGCAUUGUGAGCACUUAAAGU -61
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