MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-17-P1a2

Family name MIR-17 (all species)
Seed AAAGUGC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-17-P1a1  Mal-Mir-17-P1d  Mal-Mir-17-P2a2a  Mal-Mir-17-P2a2b  Mal-Mir-17-P4a1  Mal-Mir-17-P4a2  Mal-Mir-17-P4c  Mal-Mir-17-P4d 
Orthologues Aca-Mir-17-P1a  Ami-Mir-17-P1a  Bta-Mir-17-P1a  Cfa-Mir-17-P1a  Cja-Mir-17-P1a  Cli-Mir-17-P1a  Cmi-Mir-17-P1a  Cpi-Mir-17-P1a  Cpo-Mir-17-P1a  Dno-Mir-17-P1a  Dre-Mir-17-P1a2  Eca-Mir-17-P1a  Ete-Mir-17-P1a  Gga-Mir-17-P1a  Gja-Mir-17-P1a  Gmo-Mir-17-P1a2  Hsa-Mir-17-P1a  Laf-Mir-17-P1a  Lch-Mir-17-P1a  Loc-Mir-17-P1a  Mdo-Mir-17-P1a  Mml-Mir-17-P1a  Mmr-Mir-17-P1a  Mmu-Mir-17-P1a  Mun-Mir-17-P1a  Neu-Mir-17-P1a  Oan-Mir-17-P1a  Ocu-Mir-17-P1a  Pab-Mir-17-P1a  Pbv-Mir-17-P1a  Rno-Mir-17-P1a  Sha-Mir-17-P1a  Spt-Mir-17-P1a  Sto-Mir-17-P1a  Tgu-Mir-17-P1a  Tni-Mir-17-P1a2  Xtr-Mir-17-P1a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884718.1: 1738987-1739045 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAUGAACAUUGAGAGGUCAGUGUAGUGCCAAAGUGCUUACAGUGCAGGUAGUUUUAUAAGAUCUACUGCAGUGAAGGCACUUUCAGCACUGUUCUGAUGAUAACUAAAGCAGCUGCU
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Structure
        10          20        30         40        50         
CCCAUGAACAUUGAGAG--     UG      C-|        A  G     G   UUUUA 
                   GUCAG  UAGUGC  AAAGUGCUU CA UGCAG UAG     \
                   UAGUC  GUCACG  UUUCACGGA GU ACGUC AUC     U
UCGUCGACGAAAUCAAUAG     UU      AC^        A  G     -   UAGAA 
       110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-17-P1a2_5p
mirBase accessionNone
Sequence 
0- CAAAGUGCUUACAGUGCAGGUAG -23
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Star sequence

Mal-Mir-17-P1a2_3p*
mirBase accessionNone
Sequence 
36- ACUGCAGUGAAGGCACUUUCAGC -59
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