MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-17-P2a2a

Family name MIR-17 (all species)
Seed AAGGUGC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-17-P1a1  Mal-Mir-17-P1a2  Mal-Mir-17-P1d  Mal-Mir-17-P2a2b  Mal-Mir-17-P4a1  Mal-Mir-17-P4a2  Mal-Mir-17-P4c  Mal-Mir-17-P4d 
Orthologues Aca-Mir-17-P2a  Ami-Mir-17-P2a  Bta-Mir-17-P2a  Cfa-Mir-17-P2a  Cja-Mir-17-P2a  Cli-Mir-17-P2a  Cmi-Mir-17-P2a  Cpi-Mir-17-P2a  Cpo-Mir-17-P2a  Dno-Mir-17-P2a  Dre-Mir-17-P2a2  Eca-Mir-17-P2a  Ete-Mir-17-P2a  Gga-Mir-17-P2a  Gja-Mir-17-P2a  Gmo-Mir-17-P2a2  Hsa-Mir-17-P2a  Laf-Mir-17-P2a  Lch-Mir-17-P2a  Loc-Mir-17-P2a  Mdo-Mir-17-P2a  Mml-Mir-17-P2a  Mmr-Mir-17-P2a  Mmu-Mir-17-P2a  Mun-Mir-17-P2a  Neu-Mir-17-P2a  Oan-Mir-17-P2a  Ocu-Mir-17-P2a  Pab-Mir-17-P2a  Pbv-Mir-17-P2a  Rno-Mir-17-P2a  Sha-Mir-17-P2a  Spt-Mir-17-P2a  Sto-Mir-17-P2a  Tgu-Mir-17-P2a  Tni-Mir-17-P2a2  Xtr-Mir-17-P2a 
Node of Origin (locus) M. albus
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884718.1: 1738638-1738702 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AACUUGCUUUUCUUCCUCUAGUUCUUAUGCUAAGGUGCAUCUAGUGCAGAUAGUGAACUAGACGAGCACCUACUGCCCUAAGUGCUCCUUCUGGCAUACGGUGCUGGAACUCUCACCUGCUCUGU
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Structure
        10         20         30          40        50        60 
AACUUGCUUUUCUUCCU-     U  -       --|  U   UC   U    A   UGAACUA 
                  CUAGU CU UAUGCUA  AGG GCA  UAG GCAG UAG       G
                  GGUCG GG AUACGGU  UCC CGU  AUC CGUC AUC       A
UGUCUCGUCCACUCUCAA     U  C       CU^  U   GA   C    -   CACGAGC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-17-P2a2a_5p
mirBase accessionNone
Sequence 
0- UAAGGUGCAUCUAGUGCAGAUAG -23
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Star sequence

Mal-Mir-17-P2a2a_3p*
mirBase accessionNone
Sequence 
41- ACUGCCCUAAGUGCUCCUUCUGGC -65
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