MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-425

Family name MIR-425 (all species)
Seed AUGACAC
Species Cow (Bos taurus)
MiRBase ID bta-mir-425
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037349.1: 50971475-50971537 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-191 NC_037349.1: 50970994-50971057 [+] UCSC Ensembl
Mir-425 NC_037349.1: 50971475-50971537 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGCUCACGAGGCAUGGAAAGCGCUUUGGAAUGACACGAUCACUCCCGUUGAGUGGGCACCCAAGAAGCCAUCGGGAAUGUCGUGUCCGCCCAGUGCUCUUUCGGAGCUUCCCAGCGGGGCC
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Structure
        10          20        30        40        50        60  
CUUGCUCACGAGGCAUG--|    C  U    AAU       U  C     U  A  GGGCAC 
                   GAAAG GC UUGG   GACACGA CA UCCCG UG GU      \
                   CUUUC CG GACC   CUGUGCU GU AGGGC AC CG      C
CCGGGGCGACCCUUCGAGG^    U  U    CGC       -  A     U  -  AAGAAC 
 120       110       100        90         80         70
Deep sequencing
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CommentThere are Dicer cuts -1 and -2 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-425_5p
mirBase accessionMIMAT0003832
Sequence 
0- AAUGACACGAUCACUCCCGUUGAGU -25
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Proposed targets TargetScanVert: bta-miR-425-5p
Star sequence

Bta-Mir-425_3p*
mirBase accessionMIMAT0003833
Sequence 
40- CAUCGGGAAUGUCGUGUCCGCCC -63
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Proposed targets TargetScanVert: bta-miR-425-3p