Mir-425

MirGeneDB ID

Pbv-Mir-425

Family name

MIR-425 (all species)

Seed

AUGACAC

Species

Burmese python (Python bivittatus)

MiRBase ID

pbv-mir-425

Paralogues

Orthologues

Aca-Mir-425 Ami-Mir-425 Bta-Mir-425 Cfa-Mir-425 Cli-Mir-425 Cmi-Mir-425 Cpi-Mir-425 Cpo-Mir-425 Dno-Mir-425 Dre-Mir-425 Ete-Mir-425 Gga-Mir-425 Gja-Mir-425 Gmo-Mir-425 Hsa-Mir-425 Loc-Mir-425 Mal-Mir-425 Mdo-Mir-425 Mml-Mir-425 Mmu-Mir-425 Mun-Mir-425 Oan-Mir-425 Ocu-Mir-425 Rno-Mir-425 Sha-Mir-425 Spt-Mir-425 Sto-Mir-425 Tgu-Mir-425 Tni-Mir-425 Xla-Mir-425-P1 Xla-Mir-425-P2 Xtr-Mir-425

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Gnathostomata

Genome context
(GCA_000186305.2_Python_molurus_bivittatus)

KE954653.1: 223828-223889 [+]

Clustered miRNAs
(< 50kb from Mir-425)

Mir-191 KE954653.1: 219604-219667 [+]
Mir-425 KE954653.1: 223828-223889 [+]
Mir-2970 KE954653.1: 225941-225999 [+]

Precursor
(pre-Mir +30nt flank)

AGGAGGAUUCAGGAAGAGAAAUUGCCGAGGAAUGACACGAUCACUCCCGCUGAGCGAGUGGACGCAGAGCCACGGGGCUGUCGUGUCUGUCCUGAGCUUUUUCCAAGAUCCCAGAUGAGCCC

Get precursor sequence

Structure

        10          20        30        40        50        60  
AGGAGGAUUCAGGAAGA--|   UU  CG    AU       U  CU    C  A  GAGUGG 
                   GAAA  GC  AGGA  GACACGA CA  CCCG UG GC      \
                   CUUU  CG  UCCU  CUGUGCU GU  GGGC AC CG      A
CCCGAGUAGACCCUAGAAC^   UU  AG    GU       -  CG    -  -  AGACGC 
120       110       100        90         80          70