MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-425

Family name MIR-425 (all species)
Seed AUGACAC
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-425
Paralogues
Orthologues Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(anoCar2)		 2: 187863035-187863096 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-2970 2: 187861425-187861483 [-] UCSC Ensembl
Mir-425 2: 187863035-187863096 [-] UCSC Ensembl
Mir-191 2: 187865108-187865171 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAAGACACAAGAGCAGGAAUGGUUUUGGAAUGACACGAUCACUCCCGCUGAGCGAGCAGAGCCACGGCCACGGGGAUGUCGUGUCUGUCCAAAACUAUUUCAAAUAACCCAGCCUGGCUC
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Structure
        10          20        30        40        50        60  
AGGAAGACACAAGAGCA--|             AU       U  CU    C  A  GAGCAG 
                   GGAAUGGUUUUGGA  GACACGA CA  CCCG UG GC      \
                   CUUUAUCAAAACCU  CUGUGCU GU  GGGC AC CG      A
CUCGGUCCGACCCAAUAAA^             GU       -  AG    -  -  GCACCG 
120       110       100        90         80          70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsNo
Tissue expression
-   +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-425_5p
mirBase accessionMIMAT0021954
Sequence 
0- AAUGACACGAUCACUCCCGCUGAGC -25
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Star sequence

Aca-Mir-425_3p*
mirBase accessionMIMAT0021955
Sequence 
39- CCACGGGGAUGUCGUGUCUGUCC -62
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