MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-425-P2

Family name MIR-425 (all species)
Seed AUGACAC
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-425-2
Paralogues Xla-Mir-425-P1 
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xtr-Mir-425 
Node of Origin (locus) X. laevis
Node of Origin (family) Gnathostomata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030731.1: 109581732-109581794 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425-P2)		 Mir-425-P2 NC_030731.1: 109581732-109581794 [-] UCSC Ensembl
Mir-191-P2 NC_030731.1: 109586194-109586253 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCCGGCGCCAUGGAGAGACUUAGCCUUGGAAUGACACGAUCACUCCCGUUGAGCCGAAACACACAGUGCCAUCGGGAAUAUCGUGUCGCUCCAAAGCUCUCUCUUCGACACCAGUCAAGACA
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Structure
        10          20        30        40        50        60  
AGCCGGCGCCAUGGAGA--| CUU   C     A         CAC     U  A CCGAAAC 
                   GA   AGC UUGGA UGACACGAU   UCCCG UG G       \
                   CU   UCG AACCU GCUGUGCUA   AGGGC AC C       A
ACAGAACUGACCACAGCUU^ CUC   A     C         UA-     U  - GUGACAC 
 120       110       100        90        80          70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-425-P2_5p
mirBase accessionMIMAT0046592
Sequence 
0- AAUGACACGAUCACUCCCGUUGAG -24
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Star sequence

Xla-Mir-425-P2_3p*
mirBase accessionMIMAT0046594
Sequence 
40- CAUCGGGAAUAUCGUGUCGCUCC -63
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