MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-425

Family name MIR-425 (all species)
Seed AUGACAC
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-425
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041749.1: 91030435-91030497 [-]
Clustered miRNAs
(< 50kb from Mir-425)
Mir-425 NC_041749.1: 91030435-91030497 [-]
Mir-191 NC_041749.1: 91032820-91032883 [-]
Precursor
(pre-Mir +30nt flank)
CUAGACUCCAUGGGAGAGAAAUCGCUUUGGAAUGACACGAUCACUCCCGUUGAGCGGACAGCCAAGAAGCCAUCGGGAAUAUCGUGUCCGUCCAAAGCUCUUUCGGGGCCUCCCAGAGAAACU
Get precursor sequence
Structure
        10          20        30        40        50        60  
CUAGACUCCAUGGGAGA--|   UC        AU        CAC     U  A CGGACAG 
                   GAAA  GCUUUGGA  GACACGAU   UCCCG UG G       \
                   CUUU  CGAAACCU  CUGUGCUA   AGGGC AC C       C
UCAAAGAGACCCUCCGGGG^   CU        GC        UA-     U  - GAAGAAC 
 120       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-425_5p

mirBase accessionMIMAT0007154
Sequence
0- AAUGACACGAUCACUCCCGUUGAG -24
Get sequence
Star sequence

Oan-Mir-425_3p*

mirBase accessionMIMAT0007155
Sequence
40- CAUCGGGAAUAUCGUGUCCGUCC -63
Get sequence