MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-425

Family name MIR-425 (all species)
Seed AUGACAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-425
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(canFam3_add)		 chr20: 40144613-40144675 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-191 chr20: 40144135-40144198 [+] UCSC Ensembl
Mir-425 chr20: 40144613-40144675 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGGGCCUGCGGAAAGGAAAGAGCUUUGGAAUGACACGAUCACUCCCGUUGAGUGGGCACCCAAGAAGCCAUCGGGAAUGUCGUGUCCGCCCAGUGCUCUUUCGGCGAUCCCAGCAGGGCCU
Get precursor sequence
Structure
        10          20        30        40        50        60  
CAUGGGCCUGCGGAAAG--|       U    AAU       U  C     U  A  GGGCAC 
                   GAAAGAGC UUGG   GACACGA CA UCCCG UG GU      \
                   CUUUCUCG GACC   CUGUGCU GU AGGGC AC CG      C
UCCGGGACGACCCUAGCGG^       U    CGC       -  A     U  -  AAGAAC 
 120       110       100        90         80         70
Deep sequencing
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CommentThere are Dicer cuts -1 and -2 on both arms.
3' NTU No
MotifsNo
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-425_5p
mirBase accessionMIMAT0006639
Sequence 
0- AAUGACACGAUCACUCCCGUUGAGU -25
Get sequence
Proposed targets TargetScanVert: cfa-miR-425
miRDB: MIMAT0006639
Star sequence

Cfa-Mir-425_3p*
mirBase accessionNone
Sequence 
40- CAUCGGGAAUGUCGUGUCCGCCC -63
Get sequence