MirGeneDB 3.0
29 microRNA genes with seed CAGCAGU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Agr-Mir-1992 None MIR-1992 CAGCAGU None None JABBOT010000016.1 10375477 10375539 - Platytrochozoa Platytrochozoa No 1 1
Cte-Mir-1992 cte-mir-1992 MIR-1992 CAGCAGU None MIMAT0009700 CAPTEscaffold_189 201929 201990 + Platytrochozoa Platytrochozoa Yes 1 1
Dgr-Mir-1992 None MIR-1992 CAGCAGU None None CAJFCJ010000020.1 618774 618835 - Platytrochozoa Platytrochozoa Unknown 1
Eba-Mir-1992 None MIR-1992 CAGCAGU None None WURV02157674.1 2512 2572 + Platytrochozoa Platytrochozoa No 1 1
Egr-Mir-1992 egr-mir-1992 MIR-1992 CAGCAGU MIMAT0041197 MIMAT0041198 APAU02000092.1 131564 131631 + Platytrochozoa Platytrochozoa No 1 1
Esc-Mir-1992 None MIR-1992 CAGCAGU None None Esc-Mir-1992_pre_SRIE01000948.1:3222342-3222480 39 101 - Platytrochozoa Platytrochozoa No 1
Gsa-Mir-1992 gsa-mir-1992 MIR-1992 CAGCAGU MIMAT0035312 MIMAT0035313 scf7180006949739 1940 2002 - Platytrochozoa Platytrochozoa No
Hru-Mir-1992 None MIR-1992 CAGCAGU None None JALGQA010000004.1 53166576 53166639 + Platytrochozoa Platytrochozoa No 1
Lan-Mir-1992 None MIR-1992 CAGCAGU None None LFEI01000407 220692 220752 + Platytrochozoa Platytrochozoa No 1
Llo-Mir-1992 None MIR-1992 CAGCAGU None None OU343006.1 11524061 11524119 - Platytrochozoa Platytrochozoa No 1
Mgi-Mir-1992 None MIR-1992 CAGCAGU None None scaffold43940 216503 216560 - Platytrochozoa Platytrochozoa No
Mom-Mir-1992 None MIR-1992 CAGCAGU None None JARFOD010069075.1 4156 4218 - Platytrochozoa Platytrochozoa No 1
Npo-Mir-1992 None MIR-1992 CAGCAGU None None JACATO010001876.1 280757 280818 - Platytrochozoa Platytrochozoa Unknown 1
Obi-Mir-1992 None MIR-1992 CAGCAGU None None KQ417055 214659 214723 - Platytrochozoa Platytrochozoa No 1 1
Ofu-Mir-1992 None MIR-1992 CAGCAGU None None CAIIXF020000007.1 19293990 19294047 - Platytrochozoa Platytrochozoa No 1
Ovu-Mir-1992 None MIR-1992 CAGCAGU None None RXHP01067614.1 139572 139636 - Platytrochozoa Platytrochozoa No 1 1
Pau-Mir-1992 None MIR-1992 CAGCAGU None None NMRA01000176.1 600304 600363 - Platytrochozoa Platytrochozoa No 1 1
Pcr-Mir-1992 None MIR-1992 CAGCAGU None None CAJQUW010011562.1 46557 46616 - Platytrochozoa Platytrochozoa No 1 1
Pdu-Mir-1992 None MIR-1992 AUUAGUG None None JAPTHN010000012.1 23661449 23661512 - Platytrochozoa Platytrochozoa No 1 1
Pve-Mir-1992 None MIR-1992 CAGCAGU None None CM062294.1:307636420-307636681 101 162 - Platytrochozoa Platytrochozoa No 1
Rph-Mir-1992 None MIR-1992 CAGCAGU None None CM018537.1 21686874 21686934 + Platytrochozoa Platytrochozoa No 1
Sma-Mir-1992 None MIR-1992 CAGCAGU None None HE601630.3 11729903 11730000 - Platytrochozoa Platytrochozoa Yes 1
Snu-Mir-1992 None MIR-1992 CAGCAGU None None CM049321.1 9019061 9019120 - Platytrochozoa Platytrochozoa Yes 1 1
War-Mir-1992 None MIR-1992 CAGCAGU None None WNLI01150749.1 2727 2787 + Platytrochozoa Platytrochozoa No 1 1 1
Lgi-Mir-1992-P1 None MIR-1992 CAGCAGU None None LOTGIsca_253 36542 36604 - L. gigantea Platytrochozoa No 1
Lgi-Mir-1992-P2 lgi-mir-1992 MIR-1992 CAGCAGU None MIMAT0009722 LOTGIsca_253 35945 36002 - L. gigantea Platytrochozoa No 1
Efe-Mir-1992-P3 None MIR-1992 CAGCAGU None None Efet.01.192781 1365 1426 - E. fetida Platytrochozoa No 1
Efe-Mir-1992-P4 None MIR-1992 CAGCAGU None None Efe-Mir-1992-P4_manual_assembly 60 121 + E. fetida Platytrochozoa Yes 1
Sme-Mir-1992-P5 sme-mir-1992 MIR-1992 CAGCAGU MIMAT0012142 MIMAT0011243 NNSW01000030_dd_Smes_g4_30 1784506 1784563 + S. mediterranea Platytrochozoa No 1

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