MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-130-P3b

Family name MIR-130 (all species)
Seed AGUGCAA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-454
Paralogues Dno-Mir-130-P1c  Dno-Mir-130-P2a  Dno-Mir-130-P2b  Dno-Mir-130-P4a 
Orthologues Bta-Mir-130-P3b  Cfa-Mir-130-P3b  Cja-Mir-130-P3b  Cmi-Mir-130-P3b  Cpo-Mir-130-P3b  Dre-Mir-130-P3b1  Eca-Mir-130-P3b  Gmo-Mir-130-P3b1  Hsa-Mir-130-P3b  Laf-Mir-130-P3b  Lch-Mir-130-P3b  Mdo-Mir-130-P3b  Mml-Mir-130-P3b  Neu-Mir-130-P3b  Oan-Mir-130-P3b  Pab-Mir-130-P3b  Sha-Mir-130-P3b  Sto-Mir-130-P3b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)		 JH569978: 830677-830741 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-130-P3b)		 Mir-130-P3b JH569978: 830677-830741 [-] UCSC Ensembl
Mir-130-P2b JH569978: 843364-843425 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUAUCCUGUUUAUUACCAGAUCCUAGAACCCUAUCGAUAUUGUCUCUGCUGUGUAAAUAGCUCUGAGUAGUGCAAUAUUGCUUAUAGGGUUUUAGUGUUUGGGAAGAACAAUGGGCAGGUUG
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Structure
        10          20        30           40        50        60 
AAAAUAUCCUGUUUAUUA--     UC            ---|        CU     GUGUAAA 
                    CCAGA  CUAGAACCCUAU   CGAUAUUGU  CUGCU       \
                    GGUUU  GAUUUUGGGAUA   GUUAUAACG  GAUGA       U
GUUGGACGGGUAACAAGAAG     GU            UUC^        U-     GUCUCGA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Star sequence

Dno-Mir-130-P3b_5p*
mirBase accessionMIMAT0047904
Sequence 
0- ACCCUAUCGAUAUUGUCUCUGCU -23
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Mature sequence

Dno-Mir-130-P3b_3p
mirBase accessionMIMAT0047905
Sequence 
40- UAGUGCAAUAUUGCUUAUAGGGUUU -65
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