MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-130-P3b

Family name MIR-130 (all species)
Seed AGUGCAA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-454
Paralogues Oan-Mir-130-P1a  Oan-Mir-130-P1b  Oan-Mir-130-P1c  Oan-Mir-130-P2a  Oan-Mir-130-P2b 
Orthologues Bta-Mir-130-P3b  Cfa-Mir-130-P3b  Cja-Mir-130-P3b  Cmi-Mir-130-P3b  Cpo-Mir-130-P3b  Dno-Mir-130-P3b  Dre-Mir-130-P3b1  Eca-Mir-130-P3b  Gmo-Mir-130-P3b1  Hsa-Mir-130-P3b  Laf-Mir-130-P3b  Lch-Mir-130-P3b  Mdo-Mir-130-P3b  Mml-Mir-130-P3b  Neu-Mir-130-P3b  Pab-Mir-130-P3b  Sha-Mir-130-P3b  Sto-Mir-130-P3b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041744.1: 11797223-11797287 [-]
Clustered miRNAs
(< 50kb from Mir-130-P3b)		 Mir-130-P3b NC_041744.1: 11797223-11797287 [-]
Mir-130-P2b NC_041744.1: 11809710-11809771 [-]
Mir-130-P1b NC_041744.1: 11810731-11810793 [-]
Precursor
(pre-Mir +30nt flank)
CAUUUCCUGUGGAUAUUACCAGAUCCUGGAACCCUAUCGAUAUUGUCUCUGCUGUGUAAAUAGCUGUGAGUAGUGCAAUAUUGCUUAUAGGGUUUUAGUGUUUGGGAAAACCAUUGGGCAGAUUG
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Structure
        10          20        30           40        50        60 
CAUUUCCUGUGGAUAUUA--     UC            ---|        CU     GUGUAAA 
                    CCAGA  CUGGAACCCUAU   CGAUAUUGU  CUGCU       \
                    GGUUU  GAUUUUGGGAUA   GUUAUAACG  GAUGA       U
GUUAGACGGGUUACCAAAAG     GU            UUC^        U-     GUGUCGA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Br Ce He Ki Te
Star sequence

Oan-Mir-130-P3b_5p*
mirBase accessionMIMAT0007156
Sequence 
0- ACCCUAUCGAUAUUGUCUCUGCU -23
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Mature sequence

Oan-Mir-130-P3b_3p
mirBase accessionMIMAT0007157
Sequence 
40- UAGUGCAAUAUUGCUUAUAGGGUUU -65
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