MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-130-P3b

Family name MIR-130 (all species)
Seed AGUGCAA
Species Horse (Equus caballus)
MiRBase ID eca-mir-454
Paralogues Eca-Mir-130-P1c  Eca-Mir-130-P2a  Eca-Mir-130-P2b  Eca-Mir-130-P4a 
Orthologues Bta-Mir-130-P3b  Cfa-Mir-130-P3b  Cja-Mir-130-P3b  Cmi-Mir-130-P3b  Cpo-Mir-130-P3b  Dno-Mir-130-P3b  Dre-Mir-130-P3b1  Gmo-Mir-130-P3b1  Hsa-Mir-130-P3b  Laf-Mir-130-P3b  Lch-Mir-130-P3b  Mdo-Mir-130-P3b  Mml-Mir-130-P3b  Neu-Mir-130-P3b  Oan-Mir-130-P3b  Pab-Mir-130-P3b  Sha-Mir-130-P3b  Sto-Mir-130-P3b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009158.1: 33581060-33581124 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-130-P3b)		 Mir-130-P3b CM009158.1: 33581060-33581124 [-] UCSC Ensembl
Mir-130-P2b CM009158.1: 33590204-33590265 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUAUUUCCUGUUAACCACCAGAUCCUAGAACCCUAUCGAUAUUGUCUCUGCUGUGUAAAUCGCUCUGAGUAGUGCAAUAUUGCUUAUAGGGUUUUGGUGUUUGGGAAGAACAAUGAGGAGGCUG
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Structure
        10          20        30           40        50        60 
AAUAUUUCCUGUUAACCA--     UC            ---|        CU     GUGUAAA 
                    CCAGA  CUAGAACCCUAU   CGAUAUUGU  CUGCU       \
                    GGUUU  GGUUUUGGGAUA   GUUAUAACG  GAUGA       U
GUCGGAGGAGUAACAAGAAG     GU            UUC^        U-     GUCUCGC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-130-P3b_5p*
mirBase accessionNone
Sequence 
0- ACCCUAUCGAUAUUGUCUCUGCU -23
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Mature sequence

Eca-Mir-130-P3b_3p
mirBase accessionMIMAT0013042
Sequence 
40- UAGUGCAAUAUUGCUUAUAGGGUUU -65
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